ProteinReDiff: Complex-based ligand-binding proteins redesign by equivariant diffusion-based generative models
☆39Nov 25, 2024Updated last year
Alternatives and similar repositories for Protein_Redesign
Users that are interested in Protein_Redesign are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆90Jun 23, 2024Updated last year
- Protein Design by Machine Learning guided Directed Evolution☆48Jan 1, 2026Updated 4 months ago
- protein docking stuff☆52Apr 2, 2026Updated last month
- ML-optimized library design with improved fitness and diversity for protein engineering☆37Nov 5, 2025Updated 6 months ago
- Protein Origami via Genetic Fusions☆18Sep 19, 2022Updated 3 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆13Sep 29, 2023Updated 2 years ago
- ☆43Jun 12, 2025Updated 11 months ago
- ☆11Mar 28, 2024Updated 2 years ago
- Multimodal Contrastive Representation Learning in Augmented Biomedical Knowledge Graphs☆32Dec 8, 2025Updated 5 months ago
- ProteinDesign with RFdiffusion and ProteinMPNN/LigandMPNN☆23Mar 6, 2025Updated last year
- Fold Conditioned protein design pipeline based on AF2Multimer Hallucination☆52Mar 25, 2026Updated last month
- Structure prediction and design of proteins with noncanonical amino acids☆131Feb 1, 2026Updated 3 months ago
- Protein structure diffusion model for unconditional protein generation and motif scaffolding☆192Jun 24, 2024Updated last year
- ☆88Nov 25, 2025Updated 5 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆74Jul 2, 2025Updated 10 months ago
- PyPEF – Pythonic Protein Engineering Framework☆14Updated this week
- ☆28Aug 8, 2025Updated 9 months ago
- Protein-ligand structure prediction☆240Jul 31, 2025Updated 9 months ago
- ☆98Oct 14, 2025Updated 7 months ago
- ☆12May 16, 2020Updated 6 years ago
- Target-aware Variational Auto-encoders for Ligand Generation with Multimodal Protein Representation Learning☆32May 17, 2024Updated 2 years ago
- DrugPipe: Generative artificial intelligence-assisted virtual screening pipeline for generalizable and efficient drug repurposing☆18Jun 9, 2025Updated 11 months ago
- A Python package to manage protein design workflows on computing clusters and local machines. Documentation can be found here: https://pr…☆43May 11, 2026Updated last week
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆29May 24, 2024Updated last year
- ☆47Sep 16, 2024Updated last year
- GRACE: Generative Renaissance in Artificial Computational Enzyme Design☆19Jan 8, 2025Updated last year
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…☆94Jun 11, 2025Updated 11 months ago
- ☆69Apr 8, 2025Updated last year
- A comprehensive benchmark on the performances of multiple protein backbone generative models.☆68Feb 2, 2026Updated 3 months ago
- A computational method to optimize degenerate codons for synthesizing an informed combinatorial mutagenesis protein variant library☆17Feb 18, 2025Updated last year
- Neural Iterative Selection-Expansion using LigandMPNN/LASErMPNN and Boltz-2x☆33May 11, 2026Updated last week
- LatentDE: Latent-based Directed Evolution for Protein Sequence Design☆38Apr 2, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Learning Protein-Ligand Properties with Atomic Environment Vectors☆10Apr 19, 2024Updated 2 years ago
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆38Nov 7, 2024Updated last year
- FABind: Fast and Accurate Protein-Ligand Binding (NeurIPS 2023)☆142Jul 16, 2025Updated 10 months ago
- An Interface-Predicting Language Model for Designing Peptide-Guided Protein Degraders☆16Sep 10, 2024Updated last year
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆72Feb 21, 2026Updated 2 months ago
- ☆63Apr 9, 2024Updated 2 years ago
- Multimodal Pretraining for Unsupervised Protein Representation Learning☆22Jul 30, 2024Updated last year