csi-greifflab / developability_profiling
☆21Updated 3 months ago
Alternatives and similar repositories for developability_profiling:
Users that are interested in developability_profiling are comparing it to the libraries listed below
- An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.☆24Updated last year
- KA-Search: Rapid and exhaustive sequence identity search of known antibodies☆22Updated 9 months ago
- a fast and accurate physical energy function extended from EvoEF for protein sequence design☆29Updated last year
- Official open-source of Accurate structure prediction of immune proteins using parameter-efficient transfer learning☆21Updated last month
- An antibody-specific language model focusing on NGL prediction☆27Updated 8 months ago
- The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…☆25Updated 9 months ago
- Machine learning-driven antibody design☆55Updated last year
- ☆19Updated 3 weeks ago
- Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…☆16Updated 3 years ago
- ☆38Updated 3 months ago
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆27Updated last year
- PyPEF – Pythonic Protein Engineering Framework☆24Updated 2 weeks ago
- ☆45Updated last year
- Machine learning prediction of enzyme optimum pH☆33Updated last week
- Fast deep learning methods for large-scale protein-protein interaction screening☆36Updated this week
- Code for humanization of antibody and nanobody☆39Updated 5 months ago
- ☆66Updated last month
- Antibody Langauge Ensemble Fusion - fuses antibody structural ensemble and language representation for property prediction☆11Updated last year
- Active Learning-Assisted Directed Evolution for Protein Engineering☆50Updated 5 months ago
- ☆40Updated last month
- ☆32Updated last year
- The official repository for TherML - a machine learning approach to predict scFv and antibody thermostability☆7Updated last year
- ☆34Updated 7 months ago
- ☆26Updated 3 months ago
- Results and data from the pilot round of the Protein Engineering Tournament☆29Updated last month
- ☆19Updated 2 years ago
- Repo contains source code of the SurfaceID paper☆22Updated last year
- Metrics for our protein design competitions.☆27Updated 6 months ago
- ☆23Updated 2 years ago
- Source code for fitting thermodynamic models (MoCHI), downstream analyses and to reproduce all figures in the following publication: Mapp…☆19Updated last year