ELELAB / RosettaDDGPrediction

Related projects ⓘ

Alternatives and complementary repositories for RosettaDDGPrediction

• AspirinCode / AlphaPPImd
  Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks
  ☆25Updated 5 months ago
• bene837 / af2seq
  ☆38Updated last month
• LBM-EPFL / CARBonAra
  Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…
  ☆33Updated 4 months ago
• Kuhlman-Lab / evopro
  ☆70Updated 6 months ago
• RosettaCommons / Rosetta-DL
  A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons
  ☆31Updated 2 years ago
• ikalvet / heme_binder_diffusion
  ☆91Updated last month
• ai4protein / Pro-FSFP
  Pro-FSFP: Few-Shot Protein Fitness Prediction
  ☆54Updated 2 months ago
• WillHua127 / EnzymeFlow
  EnzymeFlow official.
  ☆50Updated last week
• KULL-Centre / _2024_cagiada_stability
  ☆43Updated 2 weeks ago
• oxpig / Graphinity
  Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity
  ☆25Updated 9 months ago
• Wublab / Pythia
  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations
  ☆25Updated last month
• Graylab / AlphaRED
  AlphaFold-initiated replica exchange protein docking
  ☆43Updated 2 months ago
• liuyf020419 / SCUBA-D
  ☆36Updated 7 months ago
• TencentAI4S / HuDiff
  Code for humanization of antibody and nanobody
  ☆22Updated last week
• patrickbryant1 / AFProfile
  Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile
  ☆63Updated 2 months ago
• huhlim / alphafold-multistate
  ☆31Updated 6 months ago
• ohuelab / ColabDesign-cyclic-binder
  ☆24Updated last year
• Furman-Lab / Peptide_docking_with_AF2_and_RosettAfold
  Code and data used in https://doi.org/10.1101/2021.08.01.454656
  ☆51Updated 2 years ago
• bwicky / oligomer_hallucination
  ☆35Updated 10 months ago
• guyujun / FunclibLocal
  Rosetta Funclib
  ☆20Updated 4 years ago
• sokrypton / af2bind
  ☆42Updated 4 months ago
• luo-group / MODIFY
  ML-optimized library design with improved fitness and diversity for protein engineering
  ☆22Updated 3 months ago
• tiejundong / FlexPose
  FlexPose, a framework for AI-based flexible modeling of protein-ligand binding pose.
  ☆48Updated 10 months ago
• GMdSilva / gms_natcomms_1705932980_data
  Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2
  ☆37Updated 5 months ago
• oxpig / Paragraph
  Antibody paratope prediction using Graph Neural Networks with minimal feature vectors
  ☆33Updated last year
• pengzhangzhi / ab_opt
  Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.
  ☆51Updated last year
• Kortemme-Lab / flex_ddG_tutorial
  ☆79Updated 2 years ago
• CAODH / SurfDock
  SurfDock is a Surface-Informed Diffusion Generative Model for Reliable and Accurate Protein-ligand Complex Prediction
  ☆49Updated 2 weeks ago
• PKUliujl / GeoSeqBuilder
  ☆18Updated last month