Alternatives and similar repositories for PSLMs

Users that are interested in PSLMs are comparing it to the libraries listed below

• PKUliujl / GeoSeqBuilder
  ☆28Updated 8 months ago
• Wublab / Pythia
  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations
  ☆66Updated 2 months ago
• KULL-Centre / _2023_Blaabjerg_SSEmb
  ☆39Updated last year
• ohuelab / Solubility_AfDesign
  Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol
  ☆32Updated 2 years ago
• luo-group / MODIFY
  ML-optimized library design with improved fitness and diversity for protein engineering
  ☆35Updated last year
• danny305 / StabilityOracle
  ☆29Updated this week
• Kuhlman-Lab / ThermoMPNN-D
  Extension of ThermoMPNN for double mutant predictions
  ☆43Updated 2 months ago
• mabr3112 / riff_diff_protflow
  ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.
  ☆34Updated 3 weeks ago
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆54Updated 4 months ago
• KULL-Centre / _2024_cagiada_stability
  ☆71Updated 6 months ago
• LBM-EPFL / CARBonAra
  Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…
  ☆45Updated 10 months ago
• lauramarie99 / ProtDesign2
  ProteinDesign with RFdiffusion and ProteinMPNN/LigandMPNN
  ☆21Updated 7 months ago
• AspirinCode / AlphaPPImd
  Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks
  ☆32Updated last year
• RosettaCommons / AF2_peptide_hallucination
  Code for designing binders to flexible peptides with AlphaFold2 Hallucination
  ☆28Updated last year
• bene837 / af2seq
  ☆44Updated last year
• liuyf020419 / SCUBA-D
  ☆61Updated last year
• wangxr0526 / EasIFA
  Code of “Multi-Modal Deep Learning Enables Ultrafast and Accurate Annotation of Enzymatic Active Sites”
  ☆40Updated 7 months ago
• ProteinDesignLab / protpardelle-1c
  Updated Protpardelle models with more robust motif scaffolding and multichain support
  ☆38Updated this week
• wallnerlab / AFsample2
  Modelling protein conformational landscape with Alphafold
  ☆53Updated last month
• Bitbol-Lab / rag-esm
  RAG-ESM is a retrieval-augmented framework that allows to condition pretrained ESM2 protein language models on homologous sequences
  ☆24Updated last month
• regeneron-mpds / propermab
  ☆36Updated 6 months ago
• masoudk / AsiteDesign
  ☆13Updated 2 years ago
• amelvim / antibody-diffusion-properties
  Guiding diffusion models for antibody sequence and structure co-design with developability properties.
  ☆33Updated 11 months ago
• amyguo1997 / dynamic_protein_design
  Code for deep learning guided design of dynamic proteins
  ☆30Updated last year
• pengzhangzhi / ab_opt
  Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.
  ☆60Updated last year
• bwicky / SAPP_DMX
  ☆23Updated last month
• AmeyaHarmalkar / therML
  The official repository for TherML - a machine learning approach to predict scFv and antibody thermostability
  ☆13Updated 2 years ago
• ak422 / DDAffinity
  ☆22Updated 4 months ago
• data2code / afpdb
  Efficient manipulation of protein structures in Python
  ☆58Updated last week
• adaptyvbio / competition_metrics
  Metrics for our protein design competitions.
  ☆35Updated 11 months ago