LPDI-EPFL / masif-neosurfLinks
MaSIF-neosurf: surface-based protein design for ternary complexes.
☆139Updated last month
Alternatives and similar repositories for masif-neosurf
Users that are interested in masif-neosurf are comparing it to the libraries listed below
Sorting:
- ☆184Updated 2 weeks ago
- An accurate and trainable end-to-end protein-ligand docking framework☆101Updated 4 months ago
- Diffusion model based protein-ligand flexible docking method☆108Updated 9 months ago
- Sidechain conditioning and modeling for full-atom protein sequence design☆114Updated last month
- ☆106Updated 2 months ago
- ☆72Updated 5 months ago
- ☆135Updated 3 weeks ago
- A compilation of deep learning methods for protein design☆97Updated 2 years ago
- ☆119Updated last year
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆181Updated 5 months ago
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆63Updated 2 months ago
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆62Updated last month
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…☆82Updated last month
- Masif seed paper repository☆156Updated 2 years ago
- ☆121Updated 2 years ago
- Physics-Guided All-Atom Diffusion Model for Accurate Protein-Ligand Complex Prediction☆66Updated this week
- ☆92Updated 9 months ago
- Official repository of GENzyme☆53Updated 8 months ago
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆60Updated last year
- ☆110Updated 2 years ago
- A bunch of shell utilities for dealing the silent files☆65Updated 2 months ago
- Official repository for DiffPepBuilder and DiffPepDock tools☆94Updated last week
- PINDER: The Protein INteraction Dataset and Evaluation Resource☆131Updated 8 months ago
- [ICLR2025] Official Implementation of IgGM: A Generative Model for Functional Antibody and Nanobody Design☆75Updated 2 months ago
- ☆130Updated last month
- ☆115Updated last month
- Scripts for virtual screening, cross docking and protein relax using Schrödinegr and Rosetta☆78Updated 3 months ago
- Deep Site and Docking Pose (DSDP) is a blind docking strategy accelerated by GPUs, developed by Gao Group. For the site prediction part, …☆59Updated last month
- Evaluating Protein Binding Interfaces with Transformer Networks☆47Updated last year
- Official repository for the Deep Docking protocol☆120Updated last year