MaSIF-neosurf: surface-based protein design for ternary complexes.
☆177Jun 25, 2026Updated last month
Alternatives and similar repositories for masif-neosurf
Users that are interested in masif-neosurf are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Sidechain conditioning and modeling for full-atom protein sequence design☆148Nov 11, 2025Updated 9 months ago
- SurfDock is a Surface-Informed Diffusion Generative Model for Reliable and Accurate Protein-ligand Complex Prediction☆255Sep 29, 2025Updated 10 months ago
- repo for DynamicBind: Predicting ligand-specific protein-ligand complex structure with a deep equivariant generative model☆303Dec 23, 2025Updated 7 months ago
- In silico directed evolution of peptide binders with AlphaFold☆274Apr 24, 2026Updated 3 months ago
- ☆15Mar 28, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- PLACER is graph neural network for local prediction of protein-ligand conformational ensembles.☆262Nov 5, 2025Updated 9 months ago
- ☆622Feb 6, 2025Updated last year
- A geometric flow matching model for generative protein-ligand docking and affinity prediction. (ISMB 2025)☆144Sep 3, 2025Updated 11 months ago
- AlphaFold Meets Flow Matching for Generating Protein Ensembles☆540Mar 22, 2026Updated 4 months ago
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆90Jun 23, 2024Updated 2 years ago
- Utility scripts to generate and evaluate parametrically guided beta barrel protein backbone structures.☆13Nov 14, 2025Updated 9 months ago
- Code used to mine surfaces.☆35Feb 23, 2025Updated last year
- Predict multiple protein conformations using sequence clustering and AlphaFold2.☆190Oct 7, 2025Updated 10 months ago
- Plausibility checks for generated molecule poses.☆399Mar 7, 2026Updated 5 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- NeuralPLexer: State-specific protein-ligand complex structure prediction with a multi-scale deep generative model☆334Oct 6, 2025Updated 10 months ago