Alternatives and similar repositories for flex_ddG_tutorial:

Users that are interested in flex_ddG_tutorial are comparing it to the libraries listed below

• ikalvet / heme_binder_diffusion
  ☆122Updated 6 months ago
• prihoda / AbNumber
  Convenience Python APIs for antibody numbering using ANARCI
  ☆95Updated 3 months ago
• hefeda / design_tools
  A compilation of deep learning methods for protein design
  ☆97Updated 2 years ago
• JeffSHF / ColabDock
  Code for ColabDock paper
  ☆139Updated this week
• bcov77 / silent_tools
  A bunch of shell utilities for dealing the silent files
  ☆59Updated last month
• patrickbryant1 / EvoBind
  In silico directed evolution of peptide binders with AlphaFold
  ☆163Updated 3 weeks ago
• ProteinDesignLab / protein-design-tutorials
  Tutorials, cheat sheets, and other resources for computational methods for protein design.
  ☆111Updated last year
• oxpig / ImmuneBuilder
  Predict the structure of immune receptor proteins
  ☆133Updated 3 months ago
• Kuhlman-Lab / ThermoMPNN
  GNN trained to predict changes in thermodynamic stability for protein point mutants
  ☆164Updated 2 months ago
• rifdock / rifdock
  Rifdock Library for Conformational Search
  ☆154Updated 11 months ago
• JinyuanSun / PymolFold
  Protein folding in Pymol
  ☆108Updated 3 months ago
• haddocking / haddock3
  Official repo of the modular BioExcel version of HADDOCK
  ☆139Updated this week
• zhanghaicang / carbonmatrix_public
  ☆111Updated last week
• ELELAB / RosettaDDGPrediction
  ☆65Updated 2 months ago
• dahjan / DMS_opt
  ☆68Updated 4 years ago
• HWaymentSteele / AF_Cluster
  Predict multiple protein conformations using sequence clustering and AlphaFold2.
  ☆154Updated 2 months ago
• haddocking / prodigy
  Predict the binding affinity of protein-protein complexes from structural data
  ☆128Updated 2 weeks ago
• baker-laboratory / PLACER
  PLACER is graph neural network for local prediction of protein-ligand conformational ensembles.
  ☆118Updated last month
• patrickbryant1 / AFProfile
  Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile
  ☆66Updated 8 months ago
• Graylab / FLAb
  Fitness landscapes for antibodies
  ☆68Updated 3 months ago
• Graylab / AlphaRED
  AlphaFold-initiated replica exchange protein docking
  ☆79Updated last month
• Kuhlman-Lab / evopro
  ☆76Updated last month
• sokrypton / RFdiffusion
  Code for running RFdiffusion
  ☆11Updated last month
• jertubiana / ScanNet
  ☆125Updated last year
• piercelab / antibody_benchmark
  Antibody-Antigen Docking and Affinity Benchmark
  ☆71Updated 4 years ago
• guyujun / pyrosetta-basic
  ☆160Updated 3 years ago
• LPDI-EPFL / masif_seed
  Masif seed paper repository
  ☆150Updated last year
• LPDI-EPFL / masif-neosurf
  MaSIF-neosurf: surface-based protein design for ternary complexes.
  ☆113Updated last month
• ai4protein / Pro-Prime
  ☆55Updated 3 months ago
• jproney / AF2Rank
  ☆102Updated 2 years ago