Seismic R package. Discover cell type-trait associations in minutes for GWAS and single-cell RNA-sequencing data
☆43Dec 10, 2025Updated 6 months ago
Alternatives and similar repositories for seismic
Users that are interested in seismic are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆14Jun 24, 2024Updated 2 years ago
- Tissue-Gene Fine-Mapping☆29Mar 20, 2025Updated last year
- Calling disease-related genes☆17Apr 1, 2026Updated 3 months ago
- Integration of TWAS and Colocalization Analysis☆17Oct 29, 2024Updated last year
- Perform cell-stratified MR analysis through integrating GWAS and QTL data☆35Jan 28, 2026Updated 5 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- The local version of high-definition likelihood inference of genetic correlations (HDL-L)☆14Aug 8, 2025Updated 10 months ago
- ☆21Aug 20, 2024Updated last year
- ☆45Mar 23, 2026Updated 3 months ago
- LOGODetect is a powerful tool to identify small segments that harbor local genetic correlation between two traits/diseases.☆29Jul 30, 2025Updated 11 months ago
- deTS☆18Apr 21, 2020Updated 6 years ago
- Estimates partitioned heritability and enrichment for gene sets in complex human traits.☆23Sep 12, 2025Updated 9 months ago
- ☆12Jun 16, 2026Updated 2 weeks ago
- An R package for Mendelian Randomization in Mediation setting☆18Mar 17, 2025Updated last year
- Fine-mapping method only using summary statistics☆20Mar 23, 2016Updated 10 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.☆32Jun 4, 2024Updated 2 years ago
- GWAS genetics Fine-mapping method☆27Jun 11, 2026Updated 3 weeks ago
- Summary-level Unified Method for Modeling Integrated Transcriptome☆10Jun 27, 2023Updated 3 years ago
- Manhattan++☆29Feb 13, 2024Updated 2 years ago
- causal TWAS (cTWAS)☆51May 7, 2026Updated last month
- Network representation of LDSC results☆31Mar 16, 2022Updated 4 years ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆43May 2, 2018Updated 8 years ago
- Python script for multivariate GWAS meta-analysis☆25Dec 6, 2024Updated last year
- MR-link-2: pleiotropy robust cis MR☆23Updated this week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Multi-Omic Strategies for TWAS☆13Mar 27, 2023Updated 3 years ago
- ☆20Oct 4, 2023Updated 2 years ago
- ☆15Apr 20, 2021Updated 5 years ago
- hJAM is a hierarchical model which unifies the framework of Mendelian Randomization and Transcriptome-wide association studies.☆11Jan 19, 2024Updated 2 years ago
- Ordering gene-expression and functional events in single-cell experiments☆33May 31, 2026Updated last month
- Estimate genetic correlation using predicted expression☆27Mar 8, 2018Updated 8 years ago
- Epigenomewide Association Studies (EWAS) with FUnctional Summary-based ImputatiON (FUSION)☆12Mar 24, 2023Updated 3 years ago
- Pariwise analysis of GWAS☆47Sep 27, 2018Updated 7 years ago
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆61Feb 12, 2021Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- xQTLbiolinks: a comprehensive and scalable tool for integrative analysis of molecular QTLs☆41Feb 8, 2025Updated last year
- FLAMES: Accurate gene prioritization in GWAS loci☆63Dec 16, 2025Updated 6 months ago
- Extracellular vesicle-derived miRNA-mediated cell-cell communication inference for single-cell transcriptomic data☆18Apr 15, 2025Updated last year
- ☆56Jan 16, 2025Updated last year
- Obtain trait-relevant cell subpopulations by incorporating pathway activity transformed scRNA-seq data with GWAS data☆77Nov 23, 2025Updated 7 months ago
- R package for querying the DrugBank database in batch locally☆38Jul 30, 2021Updated 4 years ago
- ☆97Jul 21, 2025Updated 11 months ago