methods for functional summary-based imputation
☆106Mar 17, 2026Updated 3 months ago
Alternatives and similar repositories for fusion_twas
Users that are interested in fusion_twas are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Leveraging functional information to improve GWAS summary statistic imputation☆21Aug 10, 2021Updated 4 years ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆48Aug 30, 2023Updated 2 years ago
- Mediated Expression Score Regression (MESC)☆29Nov 4, 2025Updated 8 months ago
- MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets☆41Apr 26, 2024Updated 2 years ago
- UTMOST (unified test for molecular signatures) is a method for cross-tissue gene expression imputation for transcriptome-wide association…☆46Oct 23, 2025Updated 8 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Estimate genetic correlation using predicted expression☆27Mar 8, 2018Updated 8 years ago
- MetaXcan software and manuscript☆199Jun 7, 2026Updated last month
- 🌓 Allele specific analyses across cell states and conditions☆11Nov 28, 2022Updated 3 years ago
- A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics☆42Sep 18, 2025Updated 9 months ago
- Repo for the R package coloc☆201Dec 4, 2025Updated 7 months ago
- ☆11Jan 30, 2025Updated last year
- Stratified squared trans-ethnic genetic correlation☆14May 12, 2022Updated 4 years ago
- ☆23Apr 19, 2026Updated 2 months ago
- GWAS-TWAS (Transcriptome-wide association study)-Pharmacological library integration pipeline☆20Mar 30, 2021Updated 5 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆21Nov 15, 2024Updated last year
- Workflow for performing cistrome-wide associations studies☆11Jul 25, 2022Updated 3 years ago
- Perform cell-stratified MR analysis through integrating GWAS and QTL data☆35Jan 28, 2026Updated 5 months ago
- ☆26Jan 8, 2026Updated 6 months ago
- Hypothesis Prioritisation in multi-trait Colocalization☆57Apr 8, 2024Updated 2 years ago
- ☆39Jun 15, 2023Updated 3 years ago
- ☆10Jan 20, 2023Updated 3 years ago
- LocusCompareR is a R package with visualization tools for comparing two genetic association datasets.☆134Nov 24, 2022Updated 3 years ago
- Estimates partitioned heritability and enrichment for gene sets in complex human traits.☆23Sep 12, 2025Updated 9 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆27Aug 20, 2020Updated 5 years ago
- Using real genotype data, simulate a complex trait as a function of latent expression, fit eQTL weights in independent data, and perform …☆32Jun 18, 2023Updated 3 years ago
- Read PLINK BED/BIM/FAM files into R☆44Jul 26, 2021Updated 4 years ago
- Methods for converting eQTL summary statistics into TWAS SNP-weights☆14Jul 2, 2025Updated last year
- Software implementing the Latent Causal Variable Model☆65Jun 30, 2020Updated 6 years ago
- LD Score Regression (LDSC)☆789Jan 16, 2026Updated 5 months ago
- R script to make Manhattan-style plot for TWAS☆42Aug 15, 2021Updated 4 years ago
- ☆56Jan 16, 2025Updated last year
- R script that performs gene-set or gene property analysis using TWAS results.☆34Apr 10, 2026Updated 2 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- harmonization, liftover, and imputation of summary statistics from GWAS☆39Aug 28, 2020Updated 5 years ago
- phenoscanner allows users to query the PhenoScanner database of genotype-phenotype associations from inside R☆56Jul 18, 2022Updated 3 years ago
- cfdr.pleio is an R package implementing conditional and conjunctional false discovery rates for studying pleiotropic gene variants betwee…☆18Feb 9, 2023Updated 3 years ago
- 3D GWAS across multiple phenotypes☆13Oct 11, 2022Updated 3 years ago
- LOGODetect is a powerful tool to identify small segments that harbor local genetic correlation between two traits/diseases.☆29Jul 30, 2025Updated 11 months ago
- This is a pipeline for calculating weights for TWAS☆34Aug 3, 2022Updated 3 years ago
- Proteome-Wide Association Study☆51Apr 4, 2021Updated 5 years ago