gusevlab / fusion_twasLinks
methods for functional summary-based imputation
☆86Updated 3 years ago
Alternatives and similar repositories for fusion_twas
Users that are interested in fusion_twas are comparing it to the libraries listed below
Sorting:
- Visualization of Colocalization Between eQTL and GWAS Data☆84Updated 3 years ago
- LocusCompareR is a R package with visualization tools for comparing two genetic association datasets.☆115Updated 2 years ago
- Software for estimating correlation of trait effect sizes across populations☆47Updated 2 months ago
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆32Updated last month
- Enhanced version of the FastQTL QTL mapper☆67Updated 2 years ago
- Analyses conducting GWAS across the UKBB diverse superpopulations☆52Updated 2 months ago
- Portable eQTL analysis and statistical fine mapping workflow used by the eQTL Catalogue☆50Updated 3 weeks ago
- A factor analysis package☆100Updated 13 years ago
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆67Updated 9 months ago
- Fast, integrative fine mapping with functional data☆59Updated 5 years ago
- High-definition likelihood inference of genetic correlations (HDL)☆120Updated last month
- Matrix eQTL: Ultra fast eQTL analysis via large matrix operations☆84Updated last year
- ☆60Updated 3 years ago
- MMQTL is a statistical package applying meta-analysis to detect multiple QTL signals integrating signals among conditions, with control f…☆11Updated 4 months ago
- PolyFun (POLYgenic FUNctionally-informed fine-mapping)☆122Updated 7 months ago
- Sequence kernel association test (SKAT)☆50Updated this week
- Colocalization analysis of genetic association signals☆52Updated last month
- GWAS Summary Statistics Data Harmonisation☆23Updated last month
- ☆193Updated 3 years ago
- Scripts to run mQTL analyses as described in the ARIES mQTL paper☆8Updated 9 years ago
- Harmonise GWAS summary statistics against a reference VCF☆41Updated 4 years ago
- Repo for the R package coloc☆169Updated last week
- An R package for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using STAARpipeline☆66Updated 4 months ago
- HLA-TAPAS pipeline for HLA association and fine-mapping studies☆53Updated last year
- Easily download publicly available GWAS summary statistics.☆76Updated last year
- An R package for creating mirrored Manhattan plots☆18Updated 2 years ago
- Make LocusZoom-like plots with your own LD matrix.☆44Updated 3 years ago
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆19Updated 3 years ago
- ☆98Updated 3 years ago
- Development for SAIGE and SAIGE-GENE(+)☆78Updated 2 weeks ago