methods for functional summary-based imputation
☆113Mar 17, 2026Updated 7 months ago
Alternatives and similar repositories for fusion_twas
Users that are interested in fusion_twas are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Leveraging functional information to improve GWAS summary statistic imputation☆21Aug 10, 2021Updated 5 years ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆48Aug 30, 2023Updated 3 years ago
- Mediated Expression Score Regression (MESC)☆30Nov 4, 2025Updated last year
- MetaXcan software and manuscript☆204Sep 9, 2026Updated last month
- Read PLINK BED/BIM/FAM files into R☆44Jul 26, 2021Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets☆43Apr 26, 2024Updated 2 years ago
- ☆23Aug 28, 2026Updated 2 months ago
- UTMOST (unified test for molecular signatures) is a method for cross-tissue gene expression imputation for transcriptome-wide association…☆45Oct 23, 2025Updated last year
- Repo for the R package coloc☆214Oct 30, 2026Updated last week
- LocusCompareR is a R package with visualization tools for comparing two genetic association datasets.☆137Jul 8, 2026Updated 3 months ago
- Software to infer latent pleiotropic components from GWAS summary data☆18Jan 30, 2025Updated last year
- 🌓 Allele specific analyses across cell states and conditions☆11Nov 28, 2022Updated 3 years ago
- LD Score Regression (LDSC)☆806Jan 16, 2026Updated 9 months ago
- Estimate genetic correlation using predicted expression☆28Mar 8, 2018Updated 8 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- harmonization, liftover, and imputation of summary statistics from GWAS☆40Aug 28, 2020Updated 6 years ago
- ☆13Jan 30, 2025Updated last year
- ☆27Aug 20, 2020Updated 6 years ago
- ☆21Nov 15, 2024Updated last year
- Stratified squared trans-ethnic genetic correlation☆14May 12, 2022Updated 4 years ago
- ☆26Updated this week
- A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics☆46Sep 18, 2025Updated last year
- ☆40Jun 15, 2023Updated 3 years ago
- Python command line tool for Multi-Trait Analysis of GWAS (MTAG)☆217Jul 6, 2023Updated 3 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Hypothesis Prioritisation in multi-trait Colocalization☆60Apr 8, 2024Updated 2 years ago
- Create LocusZoom-style plots in R.☆22Mar 5, 2023Updated 3 years ago
- Methods for converting eQTL summary statistics into TWAS SNP-weights☆15Jul 2, 2025Updated last year
- Using real genotype data, simulate a complex trait as a function of latent expression, fit eQTL weights in independent data, and perform …☆32Jun 18, 2023Updated 3 years ago
- This is a pipeline for calculating weights for TWAS☆35Aug 3, 2022Updated 4 years ago
- GWAS-TWAS (Transcriptome-wide association study)-Pharmacological library integration pipeline☆20Mar 30, 2021Updated 5 years ago
- ☆57Jan 16, 2025Updated last year
- DEPICT code, instructions and an example☆57Dec 10, 2025Updated 10 months ago
- ☆103Jul 21, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Workflow for performing cistrome-wide associations studies☆11Jul 25, 2022Updated 4 years ago
- phenoscanner allows users to query the PhenoScanner database of genotype-phenotype associations from inside R☆56Jul 18, 2022Updated 4 years ago
- R script to make Manhattan-style plot for TWAS☆43Aug 15, 2021Updated 5 years ago
- Single-cell disease relevance score (scDRS)☆201Aug 27, 2026Updated 2 months ago
- Software implementing the Latent Causal Variable Model☆70Jun 30, 2020Updated 6 years ago
- Fast, integrative fine mapping with functional data☆65Aug 22, 2019Updated 7 years ago
- Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.☆47Mar 16, 2026Updated 7 months ago