szhang1112 / scPRSLinks
☆31Updated 9 months ago
Alternatives and similar repositories for scPRS
Users that are interested in scPRS are comparing it to the libraries listed below
Sorting:
- identifying disease critical cell types and programs from single cell RNAseq☆58Updated 3 years ago
- Gene Set + S2G strategy annotations analyzed for disease architecture☆59Updated 3 years ago
- ☆40Updated 2 weeks ago
- Single-Cell ENhancer Target gene mapping using multimodal data with ATAC + RNA☆82Updated 9 months ago
- ☆39Updated 5 months ago
- CELLEX (CELL-type EXpression-specificity)☆43Updated 2 years ago
- Code for our paper: https://www.biorxiv.org/content/10.1101/528463v1☆18Updated 5 years ago
- ☆15Updated 2 years ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆48Updated last year
- ☆62Updated 2 years ago
- MERCI for tracing of mitochondrion transfer between single cancer and T cells☆26Updated last year
- Seismic R package. Discover cell type-trait associations in minutes for GWAS and single-cell RNA-sequencing data☆25Updated last month
- Code for single-cell eQTL analysis of memory T cell data in Nathan, et al. bioRxiv (2021)☆22Updated 2 years ago
- A record of the analysis pipelines used to create the HTAPP data☆34Updated 9 months ago
- Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)☆18Updated 2 years ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆29Updated last year
- ☆15Updated 11 months ago
- iterative clustering pipeline of big single cell datasets.☆36Updated 4 months ago
- A method which leverages scRNA-seq data to achieve two goals: (1) to infer the cell types in which the disease-associated genes manifest …☆26Updated 3 years ago
- GWAS genetics Fine-mapping method☆26Updated last year
- cell type deconvolution for multi-condition bulk RNA-seq data☆30Updated 3 years ago
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆32Updated last week
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆39Updated 5 years ago
- Single-cell Case Control Analysis☆52Updated this week
- scWGCNA☆61Updated 3 years ago
- Ordering gene-expression and functional events in single-cell experiments☆28Updated last year
- Tissue-Gene Fine-Mapping☆26Updated 10 months ago
- Obtain trait-relevant cell subpopulations by incorporating pathway activity transformed scRNA-seq data with GWAS data☆65Updated 2 months ago
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆32Updated 3 years ago
- ☆28Updated 4 years ago