dingruofan / xQTLbiolinksLinks
xQTLbiolinks: a comprehensive and scalable tool for integrative analysis of molecular QTLs
☆39Updated last year
Alternatives and similar repositories for xQTLbiolinks
Users that are interested in xQTLbiolinks are comparing it to the libraries listed below
Sorting:
- Perform cell-stratified MR analysis through integrating GWAS and QTL data☆35Updated 2 weeks ago
- A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics☆39Updated 4 months ago
- A powerful TWAS framework leveraging summary-level reference data☆32Updated 10 months ago
- ☆20Updated 5 months ago
- Hypothesis Prioritisation in multi-trait Colocalization☆55Updated last year
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆59Updated 5 years ago
- GWAS summary statistics files QC tool☆42Updated last year
- R package for investigating clustered heterogeneity in Mendelian randomization (MR) analyses.☆17Updated 4 years ago
- MR-link-2: pleiotropy robust cis MR☆21Updated 6 months ago
- Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.☆31Updated last week
- LD Score Regression in R☆51Updated 5 months ago
- ☆30Updated 4 years ago
- Tissue-Gene Fine-Mapping☆26Updated 10 months ago
- Regional association plots☆24Updated last year
- ☆40Updated 3 weeks ago
- ☆57Updated last year
- An R package for Mendelian Randomization☆39Updated last year
- This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of mole…☆35Updated last year
- MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets☆38Updated last year
- Seismic R package. Discover cell type-trait associations in minutes for GWAS and single-cell RNA-sequencing data☆25Updated 2 months ago
- R package that contains plink binaries for windows, mac and linux☆14Updated 6 years ago
- ☆23Updated 2 years ago
- R script to make Manhattan-style plot for TWAS☆41Updated 4 years ago
- R package for CAUSE☆56Updated 2 years ago
- Data objects for various sets of instruments☆47Updated 5 years ago
- An R script to perform two sample Mendelian randomization screening (with TwoSampleMR) for a custom summary statistic against a set of su…☆33Updated 3 years ago
- Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"☆27Updated 4 years ago
- PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics☆12Updated 2 years ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆42Updated 7 years ago
- Estimate Bias Due To Sample Overlap In Mendelian Randomization Studies☆11Updated 3 years ago