dingruofan / xQTLbiolinks
xQTLbiolinks: a comprehensive and scalable tool for integrative analysis of molecular QTLs
☆30Updated 2 weeks ago
Alternatives and similar repositories for xQTLbiolinks:
Users that are interested in xQTLbiolinks are comparing it to the libraries listed below
- A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics☆33Updated 2 years ago
- Perform cell-stratified MR analysis through integrating GWAS and QTL data☆24Updated 4 months ago
- Collaborative genetic studies of idiopathic pulmonary fibrosis☆16Updated 2 weeks ago
- Regional association plots☆25Updated 10 months ago
- Hypothesis Prioritisation in multi-trait Colocalization☆52Updated 10 months ago
- Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.☆21Updated this week
- R package for investigating clustered heterogeneity in Mendelian randomization (MR) analyses.☆14Updated 3 years ago
- This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of mole…☆34Updated 4 months ago
- LD Score Regression in R☆40Updated last year
- Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"☆23Updated 3 years ago
- This is a pipeline for calculating weights for TWAS☆30Updated 2 years ago
- Regional association plots☆26Updated 10 months ago
- GENI plots to visualise results from genome-wide association studies☆27Updated 4 months ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆42Updated 6 years ago
- A powerful TWAS framework leveraging summary-level reference data☆26Updated last month
- ☆22Updated last year
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆47Updated 4 years ago
- MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets☆26Updated 9 months ago
- Estimate Bias Due To Sample Overlap In Mendelian Randomization Studies☆11Updated 2 years ago
- R script to make Manhattan-style plot for TWAS☆37Updated 3 years ago
- ☆34Updated 4 years ago
- PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics☆12Updated last year
- ☆18Updated 11 months ago
- A collection of various utilities for GWAS summary statistics☆26Updated 9 months ago
- ☆25Updated 3 years ago
- Seismic R package. Discover cell type-trait associations in minutes for GWAS and single-cell RNA-sequencing data☆14Updated 2 months ago
- ☆19Updated 6 months ago
- Power calculations for Mendelian Randomisation☆22Updated 7 years ago
- Connecting GWAS summary data to analytical tools☆21Updated 10 months ago
- R package for CAUSE☆54Updated last year