☆40Jan 13, 2026Updated last month
Alternatives and similar repositories for scPrediXcan
Users that are interested in scPrediXcan are comparing it to the libraries listed below
Sorting:
- Integration of TWAS and Colocalization Analysis☆17Oct 29, 2024Updated last year
- ☆21Aug 20, 2024Updated last year
- EXpression PREdiction with Summary Statistics Only☆13Dec 10, 2025Updated 2 months ago
- Seismic R package. Discover cell type-trait associations in minutes for GWAS and single-cell RNA-sequencing data☆27Dec 10, 2025Updated 2 months ago
- ☆14Jun 24, 2024Updated last year
- R package for "Multi-tissue Transcriptome-Wide Association Studies (MTWAS)"☆16Oct 7, 2025Updated 4 months ago
- ☆13Oct 1, 2025Updated 5 months ago
- LOGODetect is a powerful tool to identify small segments that harbor local genetic correlation between two traits/diseases.☆28Jul 30, 2025Updated 7 months ago
- ☆11Mar 16, 2022Updated 3 years ago
- The local version of high-definition likelihood inference of genetic correlations (HDL-L)☆12Aug 8, 2025Updated 6 months ago
- Manhattan++☆28Feb 13, 2024Updated 2 years ago
- Fine-mapping method only using summary statistics☆20Mar 23, 2016Updated 9 years ago
- a deep generative model for single-cell survival analysis☆16Dec 2, 2025Updated 3 months ago
- cEll tyPe enrIChment☆16Dec 11, 2022Updated 3 years ago
- lhcMR☆26Mar 24, 2024Updated last year
- ☆57Jan 16, 2025Updated last year
- ☆21Nov 15, 2024Updated last year
- xQTLbiolinks: a comprehensive and scalable tool for integrative analysis of molecular QTLs☆40Feb 8, 2025Updated last year
- TCSC (Tissue co-regulation score regression) is a statistical genetics method to identify causal tissues in diseases and complex traits.☆15Oct 3, 2024Updated last year
- Stratified squared trans-ethnic genetic correlation☆14May 12, 2022Updated 3 years ago
- ☆24Jan 8, 2026Updated last month
- FLAMES: Accurate gene prioritization in GWAS loci☆57Dec 16, 2025Updated 2 months ago
- GWAS-TWAS (Transcriptome-wide association study)-Pharmacological library integration pipeline☆19Mar 30, 2021Updated 4 years ago
- 3D GWAS across multiple phenotypes☆13Oct 11, 2022Updated 3 years ago
- A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics☆39Sep 18, 2025Updated 5 months ago
- Network representation of LDSC results☆31Mar 16, 2022Updated 3 years ago
- Tissue-Gene Fine-Mapping☆26Mar 20, 2025Updated 11 months ago
- Pan cancer summary statistics from meta analyses of UK Biobank and Kaiser GERA cohorts.☆17Jul 15, 2020Updated 5 years ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆42May 2, 2018Updated 7 years ago
- An R package for phenotype generation and association testing for phenome wide associations studies (PheWAS)☆15Jul 11, 2024Updated last year
- MR-link-2: pleiotropy robust cis MR☆21Aug 4, 2025Updated 6 months ago
- A powerful TWAS framework leveraging summary-level reference data☆32Apr 1, 2025Updated 11 months ago
- causal TWAS (cTWAS)☆47Jan 20, 2026Updated last month
- Software implementing the Latent Causal Variable Model☆64Jun 30, 2020Updated 5 years ago
- ☆92Jul 21, 2025Updated 7 months ago
- Summary-level Unified Method for Modeling Integrated Transcriptome☆10Jun 27, 2023Updated 2 years ago
- Perform cell-stratified MR analysis through integrating GWAS and QTL data☆35Jan 28, 2026Updated last month
- Obtain trait-relevant cell subpopulations by incorporating pathway activity transformed scRNA-seq data with GWAS data☆67Nov 23, 2025Updated 3 months ago
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆59Feb 12, 2021Updated 5 years ago