Integrating GWAS and spatial transcriptomics for spatially resolved mapping of cells associated with human complex traits.
☆223Oct 7, 2026Updated this week
Alternatives and similar repositories for gsMap
Users that are interested in gsMap are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Single-cell disease relevance score (scDRS)☆200Aug 27, 2026Updated last month
- Tissue-Gene Fine-Mapping☆30Mar 20, 2025Updated last year
- Perform cell-stratified MR analysis through integrating GWAS and QTL data☆38Jan 28, 2026Updated 8 months ago
- Pangenome-Informed Genome Assembly (PIGA) workflow for population-scale diploid genome assembly☆42Apr 16, 2026Updated 5 months ago
- Adata Viewer: Head/Less/Shape h5ad file in terminal☆11Aug 13, 2026Updated last month
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- MeDuSA is a fine-resolution cellular deconvolution method that leverages scRNA-seq data as a reference to estimate cell-state abundance i…☆46Feb 20, 2025Updated last year
- cfdr.pleio is an R package implementing conditional and conjunctional false discovery rates for studying pleiotropic gene variants betwee…☆19Feb 9, 2023Updated 3 years ago
- ☆47Jul 5, 2026Updated 3 months ago
- ☆39Apr 11, 2025Updated last year
- ☆22Jul 21, 2026Updated 2 months ago
- SMR-Portal: an online platform for integrative analysis of GWAS and xQTL data to identify complex trait genes.☆23Dec 2, 2025Updated 10 months ago
- An R package for Mendelian Randomization in Mediation setting☆18Mar 17, 2025Updated last year
- FLAMES: Accurate gene prioritization in GWAS loci☆66Aug 25, 2026Updated last month
- Estimate genetic correlation using predicted expression☆28Mar 8, 2018Updated 8 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- A computational framework☆20Jul 23, 2026Updated 2 months ago
- crussmap is a faster tool to convert genome coordinates between difference reference assemblies.☆23May 4, 2023Updated 3 years ago
- Perturbation-response Score (PS) analysis is a method to quantify diverse perturbation responses and discover novel biological insights i…☆18Apr 20, 2024Updated 2 years ago
- A Python package for handling and visualizing GWAS summary statistics. https://cloufield.github.io/gwaslab/☆312Sep 25, 2026Updated 2 weeks ago
- Obtain trait-relevant cell subpopulations by incorporating pathway activity transformed scRNA-seq data with GWAS data☆83Nov 23, 2025Updated 10 months ago
- Causal Mixture Model for GWAS summary statistics☆102Dec 17, 2025Updated 9 months ago
- Public repo for STEP: Spatial Transcriptomics Embedding Procedure☆18Aug 6, 2026Updated 2 months ago
- Hypothesis Prioritisation in multi-trait Colocalization☆60Apr 8, 2024Updated 2 years ago
- Visualize 3D ST data in Jupyter☆26Aug 21, 2026Updated last month
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- GWAS genetics Fine-mapping method☆28Jun 11, 2026Updated 3 months ago
- ☆100Jul 21, 2025Updated last year
- A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics☆46Sep 18, 2025Updated last year
- cell type specific, trait-associated gene regulation☆31Sep 8, 2026Updated last month
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆63Feb 12, 2021Updated 5 years ago
- Seismic R package. Discover cell type-trait associations in minutes for GWAS and single-cell RNA-sequencing data☆55Dec 10, 2025Updated 9 months ago
- GWAS Tutorial for Beginners☆478Aug 3, 2026Updated 2 months ago
- qsub command for serveral cluster engine☆14Jan 14, 2025Updated last year
- The analysis of the 1KCP☆17Dec 3, 2025Updated 10 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- The local version of high-definition likelihood inference of genetic correlations (HDL-L)☆14Aug 8, 2025Updated last year
- ☆28Apr 9, 2025Updated last year
- Estimates partitioned heritability and enrichment for gene sets in complex human traits.☆27Sep 18, 2026Updated 3 weeks ago
- Integration of TWAS and Colocalization Analysis☆17Oct 29, 2024Updated last year
- Spatiotemporal modeling of spatial transcriptomics☆344Feb 25, 2026Updated 7 months ago
- ☆12Dec 4, 2023Updated 2 years ago
- ☆93Jul 28, 2026Updated 2 months ago