☆82Nov 9, 2025Updated 5 months ago
Alternatives and similar repositories for LAVA
Users that are interested in LAVA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Pleiotropy-informed conditional and conjunctional false discovery rate☆37Jun 3, 2025Updated 10 months ago
- ☆21Sep 12, 2025Updated 7 months ago
- A collection of various utilities for GWAS summary statistics☆33May 14, 2024Updated last year
- ☆30Oct 18, 2021Updated 4 years ago
- High-definition likelihood inference of genetic correlations (HDL)☆134Mar 15, 2026Updated last month
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆59Feb 12, 2021Updated 5 years ago
- cfdr.pleio is an R package implementing conditional and conjunctional false discovery rates for studying pleiotropic gene variants betwee…☆18Feb 9, 2023Updated 3 years ago
- Estimate genetic correlation using predicted expression☆25Mar 8, 2018Updated 8 years ago
- Code used for the GWAS-by-subtraction of non-cognitive skills and follow-up analyses☆19Jan 15, 2021Updated 5 years ago
- LOGODetect is a powerful tool to identify small segments that harbor local genetic correlation between two traits/diseases.☆28Jul 30, 2025Updated 8 months ago
- Fine-mapping method only using summary statistics☆20Mar 23, 2016Updated 10 years ago
- R-package for structural equation modeling based on GWAS summary data☆274Apr 3, 2026Updated 2 weeks ago
- Hypothesis Prioritisation in multi-trait Colocalization☆55Apr 8, 2024Updated 2 years ago
- A collection of commonly used formats for quick lookup.☆14Mar 26, 2026Updated 3 weeks ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A software package for performing and visualising radial multivariable Mendelian randomization analyses☆13Mar 30, 2026Updated 2 weeks ago
- A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics☆39Sep 18, 2025Updated 7 months ago
- Python command line tool for Multi-Trait Analysis of GWAS (MTAG)☆206Jul 6, 2023Updated 2 years ago
- Software to infer latent pleiotropic components from GWAS summary data☆15Jan 30, 2025Updated last year
- Rapid standardisation and quality control of GWAS or QTL summary statistics☆94Updated this week
- xQTLbiolinks: a comprehensive and scalable tool for integrative analysis of molecular QTLs☆40Feb 8, 2025Updated last year
- Integration of TWAS and Colocalization Analysis☆17Oct 29, 2024Updated last year
- Network representation of LDSC results☆31Mar 16, 2022Updated 4 years ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆42May 2, 2018Updated 7 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.☆31Jun 4, 2024Updated last year
- FLAMES: Accurate gene prioritization in GWAS loci☆58Dec 16, 2025Updated 4 months ago
- Pair-wise conditional analysis and colocalisation☆42May 2, 2024Updated last year
- R package to perform two-sample Mendelian Randomisation (MR) analyses using (potentially) overlapping samples☆68Jan 9, 2025Updated last year
- Software implementing the Latent Causal Variable Model☆65Jun 30, 2020Updated 5 years ago
- Convert GWAS sumstat files into a common format with a common reference for positions, rsids and effect alleles.☆24Sep 4, 2025Updated 7 months ago
- Pariwise analysis of GWAS☆47Sep 27, 2018Updated 7 years ago
- deTS☆18Apr 21, 2020Updated 5 years ago
- This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of mole…☆35Sep 26, 2024Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- An R package for generating comparative regional association plots☆18Sep 30, 2025Updated 6 months ago
- R package for investigating clustered heterogeneity in Mendelian randomization (MR) analyses.☆17Oct 15, 2021Updated 4 years ago
- GPA: Genetic analysis incorporating Pleiotropy and Annotation☆16Feb 27, 2020Updated 6 years ago
- Codes for our NPNT paper at Nature Metabolism☆16Feb 9, 2024Updated 2 years ago
- Binaries for tools used in genetics in an R package☆12Apr 7, 2025Updated last year
- Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).☆14Mar 16, 2026Updated last month
- PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics☆12Oct 6, 2023Updated 2 years ago