FinucaneLab / pops
☆73Updated 2 years ago
Alternatives and similar repositories for pops:
Users that are interested in pops are comparing it to the libraries listed below
- ☆46Updated 4 months ago
- Fast, integrative fine mapping with functional data☆57Updated 5 years ago
- ☆34Updated 4 years ago
- Harmonise GWAS summary statistics against a reference VCF☆41Updated 3 years ago
- Analyses conducting GWAS across the UKBB diverse superpopulations☆50Updated 5 months ago
- Colocalization analysis of genetic association signals☆51Updated 3 months ago
- ☆31Updated last year
- Software for estimating correlation of trait effect sizes across populations☆44Updated 2 years ago
- Find causal cell-types underlying complex trait genetics☆80Updated 3 weeks ago
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆30Updated last year
- Molecular QTL analysis protocol developed by ADSP Functional Genomics Consortium☆43Updated this week
- Easily download publicly available GWAS summary statistics.☆75Updated last year
- codes used in the human kidney eQTL(cf) and eQTL(ci) and snATAC-seq data☆19Updated 4 years ago
- Cross-population polygenic prediction☆79Updated 3 months ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆42Updated 6 years ago
- Robust Allele Specific Quantification and quality controL☆39Updated 3 years ago
- CELLEX (CELL-type EXpression-specificity)☆39Updated last year
- List of software packages for multi-trait / multiple-trait / multivariate / high-dimensional GWAS☆30Updated 4 months ago
- Enhanced version of the FastQTL QTL mapper☆62Updated 2 years ago
- ☆25Updated last month
- Expression Weighted Celltype Enrichment. See the package website for up-to-date instructions on usage.☆56Updated last month
- package for the causal TWAS project☆41Updated 3 weeks ago
- Single-Cell ENhancer Target gene mapping using multimodal data with ATAC + RNA☆72Updated 6 months ago
- Contains code to analyze the OneK1K data and perform eQTL mapping of 14 cell types☆26Updated 3 years ago
- ☆26Updated 4 years ago
- Collection of analysis tools for quantitative trait loci☆51Updated this week
- FOCUS: Fine-mapping Of CaUsal gene Sets☆44Updated last year
- Epimap processing and analysis code repository☆33Updated 2 years ago
- Development for SAIGE and SAIGE-GENE(+)☆70Updated 2 weeks ago
- A toolkit for QC and visualization of ATAC-seq results.☆67Updated 2 months ago