perslab / CELLECTLinks
CELLECT (CELL-type Expression-specific integration for Complex Traits)
☆81Updated 9 months ago
Alternatives and similar repositories for CELLECT
Users that are interested in CELLECT are comparing it to the libraries listed below
Sorting:
- Single-cell disease relevance score (scDRS)☆132Updated 7 months ago
- Expression Weighted Celltype Enrichment. See the package website for up-to-date instructions on usage.☆57Updated 3 months ago
- Find causal cell-types underlying complex trait genetics☆85Updated 3 months ago
- Single-Cell ENhancer Target gene mapping using multimodal data with ATAC + RNA☆74Updated last month
- Single-nuclei RNA-seq and ATAC-seq in Alzheimer's disease☆93Updated 3 years ago
- Cellular dynamics across aged human brains uncover a multicellular cascade leading to Alzheimer’s disease☆56Updated 5 months ago
- An R package to test for batch effects in high-dimensional single-cell RNA sequencing data.☆163Updated last year
- Significance analysis for clustering single-cell RNA-sequencing data☆116Updated 8 months ago
- Single Cell Cluster Evaluation☆94Updated 3 years ago
- Direct estimation of mean and covariance from single cell RNA seq experiments☆109Updated 3 weeks ago
- A Bayesian model for compositional single-cell data analysis☆163Updated 2 years ago
- trajectory inference☆100Updated 4 months ago
- R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the …☆105Updated 2 months ago
- The integration of single cell rank-based gene set enrichment analysis☆122Updated 10 months ago
- ☆30Updated last year
- CELLEX (CELL-type EXpression-specificity)☆41Updated 2 years ago
- Data and analysis scripts for our Embryo Timecourse paper.☆68Updated 5 years ago
- Methods to discover gene programs on single-cell data☆118Updated last month
- Cell type prioritization in single-cell data☆119Updated 7 months ago
- Single-Cell Clustering Assessment Framework☆101Updated last year
- In-Silico Modeling of Metabolic Heterogeneity using Single-Cell Transcriptomes☆108Updated 4 months ago
- Efficient and precise single-cell reference atlas mapping with Symphony☆106Updated 2 years ago
- A tool for unsupervised projection of single cell RNA-seq data☆96Updated 4 years ago
- Multiome GRN inference.☆123Updated last year
- ☆61Updated 5 years ago
- scDIOR: Single cell data IO softwaRe☆140Updated 3 years ago
- AUCell: score single cells with gene regulatory networks☆152Updated last year
- R package for Protein activity analysis of single-cell RNAseq.☆81Updated 2 years ago
- Easily download publicly available GWAS summary statistics.☆76Updated last year
- SCINA: A Semi-Supervised Subtyping Algorithm of Single Cells and Bulk Samples☆69Updated 3 years ago