CELLECT (CELL-type Expression-specific integration for Complex Traits)
☆93Aug 16, 2024Updated last year
Alternatives and similar repositories for CELLECT
Users that are interested in CELLECT are comparing it to the libraries listed below
Sorting:
- CELLEX (CELL-type EXpression-specificity)☆44Jun 2, 2023Updated 2 years ago
- Single cell Type Enrichment Analysis for Phenotypes (STEAP)☆14Jun 16, 2021Updated 4 years ago
- GWAS-TWAS (Transcriptome-wide association study)-Pharmacological library integration pipeline☆19Mar 30, 2021Updated 4 years ago
- Integration of TWAS and Colocalization Analysis☆17Oct 29, 2024Updated last year
- LOGODetect is a powerful tool to identify small segments that harbor local genetic correlation between two traits/diseases.☆28Jul 30, 2025Updated 7 months ago
- R package for "Multi-tissue Transcriptome-Wide Association Studies (MTWAS)"☆16Oct 7, 2025Updated 4 months ago
- Code to reproduce analysis and figures for 'Genetic mapping of etiologic brain cell types for obesity' (Timshel, eLife 2020)☆14May 20, 2021Updated 4 years ago
- Expression Weighted Celltype Enrichment. See the package website for up-to-date instructions on usage.☆60Oct 31, 2025Updated 4 months ago
- Hypothesis Prioritisation in multi-trait Colocalization☆55Apr 8, 2024Updated last year
- Find causal cell-types underlying complex trait genetics☆92Feb 8, 2026Updated 3 weeks ago
- Perform cell-stratified MR analysis through integrating GWAS and QTL data☆35Jan 28, 2026Updated last month
- Epigenomewide Association Studies (EWAS) with FUnctional Summary-based ImputatiON (FUSION)☆12Mar 24, 2023Updated 2 years ago
- ☆20Sep 12, 2025Updated 5 months ago
- Seismic R package. Discover cell type-trait associations in minutes for GWAS and single-cell RNA-sequencing data☆27Dec 10, 2025Updated 2 months ago
- ☆21Aug 20, 2024Updated last year
- Fine-mapping method only using summary statistics☆20Mar 23, 2016Updated 9 years ago
- xQTLbiolinks: a comprehensive and scalable tool for integrative analysis of molecular QTLs☆40Feb 8, 2025Updated last year
- ☆14Jun 24, 2024Updated last year
- lhcMR☆26Mar 24, 2024Updated last year
- FLAMES: Accurate gene prioritization in GWAS loci☆57Dec 16, 2025Updated 2 months ago
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆59Feb 12, 2021Updated 5 years ago
- A powerful TWAS framework leveraging summary-level reference data☆32Apr 1, 2025Updated 11 months ago
- Single-cell disease relevance score (scDRS)☆176Sep 2, 2025Updated 6 months ago
- ☆40Jan 13, 2026Updated last month
- PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics☆12Oct 6, 2023Updated 2 years ago
- ☆13Oct 1, 2025Updated 5 months ago
- Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.☆43Jan 20, 2023Updated 3 years ago
- Leveraging functional information to improve GWAS summary statistic imputation☆19Aug 10, 2021Updated 4 years ago
- ☆57Jan 16, 2025Updated last year
- A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.☆31Jun 4, 2024Updated last year
- Summary-level Unified Method for Modeling Integrated Transcriptome☆10Jun 27, 2023Updated 2 years ago
- The local version of high-definition likelihood inference of genetic correlations (HDL-L)☆12Aug 8, 2025Updated 6 months ago
- Python script for multivariate GWAS meta-analysis☆24Dec 6, 2024Updated last year
- deTS☆18Apr 21, 2020Updated 5 years ago
- cfdr.pleio is an R package implementing conditional and conjunctional false discovery rates for studying pleiotropic gene variants betwee…☆18Feb 9, 2023Updated 3 years ago
- A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics☆39Sep 18, 2025Updated 5 months ago
- Manhattan++☆28Feb 13, 2024Updated 2 years ago
- Software implementing the Latent Causal Variable Model☆64Jun 30, 2020Updated 5 years ago
- Open4Gene, A Hurdle Model-based Method for Peak-to-Gene Linkage Analysis☆16Dec 1, 2025Updated 3 months ago