CELLECT (CELL-type Expression-specific integration for Complex Traits)
☆99Aug 16, 2024Updated last year
Alternatives and similar repositories for CELLECT
Users that are interested in CELLECT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- CELLEX (CELL-type EXpression-specificity)☆44Apr 29, 2026Updated 2 months ago
- Single cell Type Enrichment Analysis for Phenotypes (STEAP)☆14Jun 16, 2021Updated 5 years ago
- GWAS-TWAS (Transcriptome-wide association study)-Pharmacological library integration pipeline☆20Mar 30, 2021Updated 5 years ago
- Integration of TWAS and Colocalization Analysis☆17Oct 29, 2024Updated last year
- LOGODetect is a powerful tool to identify small segments that harbor local genetic correlation between two traits/diseases.☆29Jul 30, 2025Updated 11 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Find causal cell-types underlying complex trait genetics☆96Feb 8, 2026Updated 4 months ago
- Hypothesis Prioritisation in multi-trait Colocalization☆57Apr 8, 2024Updated 2 years ago
- FLAMES: Accurate gene prioritization in GWAS loci☆63Dec 16, 2025Updated 6 months ago
- Code to reproduce analysis and figures for 'Genetic mapping of etiologic brain cell types for obesity' (Timshel, eLife 2020)☆14May 20, 2021Updated 5 years ago
- Perform cell-stratified MR analysis through integrating GWAS and QTL data☆35Jan 28, 2026Updated 5 months ago
- Expression Weighted Celltype Enrichment. See the package website for up-to-date instructions on usage.☆59Mar 20, 2026Updated 3 months ago
- ☆14Jun 24, 2024Updated 2 years ago
- ☆21Aug 20, 2024Updated last year
- Fine-mapping method only using summary statistics☆20Mar 23, 2016Updated 10 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Estimates partitioned heritability and enrichment for gene sets in complex human traits.☆23Sep 12, 2025Updated 9 months ago
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆61Feb 12, 2021Updated 5 years ago
- lhcMR☆26Mar 24, 2024Updated 2 years ago
- Seismic R package. Discover cell type-trait associations in minutes for GWAS and single-cell RNA-sequencing data☆40Dec 10, 2025Updated 6 months ago
- Single-cell disease relevance score (scDRS)☆191Updated this week
- cfdr.pleio is an R package implementing conditional and conjunctional false discovery rates for studying pleiotropic gene variants betwee…☆18Feb 9, 2023Updated 3 years ago
- xQTLbiolinks: a comprehensive and scalable tool for integrative analysis of molecular QTLs☆41Feb 8, 2025Updated last year
- deTS☆18Apr 21, 2020Updated 6 years ago
- Partitioning algorithm developed for LAVA☆17May 17, 2024Updated 2 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Calling disease-related genes☆17Apr 1, 2026Updated 3 months ago
- ☆45Mar 23, 2026Updated 3 months ago
- ☆12Jun 16, 2026Updated 2 weeks ago
- A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.☆32Jun 4, 2024Updated 2 years ago
- ☆11Jan 30, 2025Updated last year
- A collection of various utilities for GWAS summary statistics☆35May 14, 2024Updated 2 years ago
- Python script for multivariate GWAS meta-analysis☆25Dec 6, 2024Updated last year
- Epigenomewide Association Studies (EWAS) with FUnctional Summary-based ImputatiON (FUSION)☆12Mar 24, 2023Updated 3 years ago
- Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.☆47Mar 16, 2026Updated 3 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆56Jan 16, 2025Updated last year
- The local version of high-definition likelihood inference of genetic correlations (HDL-L)☆14Aug 8, 2025Updated 10 months ago
- Manhattan++☆29Feb 13, 2024Updated 2 years ago
- A powerful TWAS framework leveraging summary-level reference data☆34Apr 1, 2025Updated last year
- Software implementing the Latent Causal Variable Model☆65Jun 30, 2020Updated 6 years ago
- Summary-level Unified Method for Modeling Integrated Transcriptome☆10Jun 27, 2023Updated 3 years ago
- Leveraging functional information to improve GWAS summary statistic imputation☆21Aug 10, 2021Updated 4 years ago