Marijn-Schipper / FLAMESLinks
FLAMES: Accurate gene prioritization in GWAS loci
☆35Updated 3 months ago
Alternatives and similar repositories for FLAMES
Users that are interested in FLAMES are comparing it to the libraries listed below
Sorting:
- This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of mole…☆36Updated 8 months ago
- ☆21Updated this week
- Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.☆25Updated this week
- ☆16Updated 3 months ago
- Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"☆23Updated 3 years ago
- Cross-population fine-mapping☆36Updated 5 months ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆32Updated 4 years ago
- GWAS genetics Fine-mapping method☆23Updated 7 months ago
- PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics☆12Updated last year
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆42Updated 7 years ago
- Seismic R package. Discover cell type-trait associations in minutes for GWAS and single-cell RNA-sequencing data☆15Updated 3 weeks ago
- ☆22Updated 4 months ago
- A powerful TWAS framework leveraging summary-level reference data☆29Updated 2 months ago
- Regional association plots☆25Updated last year
- Methods for converting eQTL summary statistics into TWAS SNP-weights☆13Updated last year
- xQTLbiolinks: an R package for integrative analysis with xQTL data☆16Updated last year
- ☆19Updated last year
- ☆47Updated 2 weeks ago
- A collection of various utilities for GWAS summary statistics☆27Updated last year
- An R package for creating ggplot2 based miami plots.☆17Updated 2 months ago
- GENI plots to visualise results from genome-wide association studies☆27Updated 7 months ago
- Pleiotropy-informed conditional and conjunctional false discovery rate☆29Updated last year
- ☆11Updated 2 years ago
- xQTLbiolinks: a comprehensive and scalable tool for integrative analysis of molecular QTLs☆34Updated 3 months ago
- codes used in the human kidney eQTL(cf) and eQTL(ci) and snATAC-seq data☆19Updated 4 years ago
- Summary-level Unified Method for Modeling Integrated Transcriptome☆10Updated last year
- SCALLOP-INF analysis☆20Updated 8 months ago
- ☆32Updated last year
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆50Updated 4 years ago
- Integration of TWAS and Colocalization Analysis☆17Updated 7 months ago