zhenin / HDL
High-definition likelihood inference of genetic correlations (HDL)
☆108Updated last week
Alternatives and similar repositories for HDL:
Users that are interested in HDL are comparing it to the libraries listed below
- Repo for the R package coloc☆164Updated 4 months ago
- ☆60Updated 8 months ago
- LocusCompareR is a R package with visualization tools for comparing two genetic association datasets.☆112Updated 2 years ago
- methods for functional summary-based imputation☆79Updated 2 years ago
- Visualization of Colocalization Between eQTL and GWAS Data☆80Updated 2 years ago
- Analyses conducting GWAS across the UKBB diverse superpopulations☆50Updated 5 months ago
- Hypothesis Prioritisation in multi-trait Colocalization☆52Updated 11 months ago
- Rapid standardisation and quality control of GWAS or QTL summary statistics☆78Updated 3 months ago
- This is a read-only mirror of the CRAN R package repository. MendelianRandomization — Mendelian Randomization Package☆45Updated 11 months ago
- PolyFun (POLYgenic FUNctionally-informed fine-mapping)☆104Updated 3 months ago
- Linking GWAS data to analytical tools in R☆134Updated 2 years ago
- R interface to the IEU GWAS database API☆90Updated last week
- ☆193Updated 2 years ago
- R package for CAUSE☆54Updated last year
- A list of awesome tools for complex trait genetics.☆69Updated last month
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆30Updated last year
- ☆56Updated 2 months ago
- Performs the Mendelian Randomization Pleiotropy RESidual Sum and Outlier (MR-PRESSO) method.☆86Updated last year
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆47Updated 4 years ago
- Cross-population polygenic prediction☆79Updated 4 months ago
- corrplot of LDSC genetic correlation results☆50Updated 3 years ago
- Development for SAIGE and SAIGE-GENE(+)☆71Updated 2 weeks ago
- Scripts and workflows for use analyzing UK Biobank data from the DNANexus Research Analysis Platform☆55Updated last year
- Genotype-based Prediction (GenoPred)☆72Updated this week
- A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics☆33Updated 2 years ago
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆57Updated 5 months ago
- Harmonise GWAS summary statistics against a reference VCF☆41Updated 3 years ago
- Reading, querying and writing GWAS summary data in VCF format☆77Updated 11 months ago
- Python command line tool for Multi-Trait Analysis of GWAS (MTAG)☆183Updated last year
- Find causal cell-types underlying complex trait genetics☆82Updated 3 weeks ago