BennyStrobes / TGFMLinks
Tissue-Gene Fine-Mapping
☆21Updated 4 months ago
Alternatives and similar repositories for TGFM
Users that are interested in TGFM are comparing it to the libraries listed below
Sorting:
- GWAS genetics Fine-mapping method☆25Updated 9 months ago
- FLAMES: Accurate gene prioritization in GWAS loci☆41Updated 5 months ago
- This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of mole…☆36Updated 10 months ago
- ☆15Updated last month
- xQTLbiolinks: an R package for integrative analysis with xQTL data☆17Updated last year
- This is a pipeline for calculating weights for TWAS☆32Updated 3 years ago
- Methods for converting eQTL summary statistics into TWAS SNP-weights☆13Updated last month
- Seismic R package. Discover cell type-trait associations in minutes for GWAS and single-cell RNA-sequencing data☆17Updated last month
- ☆23Updated 2 weeks ago
- 🌓 Allele specific analyses across cell states and conditions☆10Updated 2 years ago
- An R package for creating ggplot2 based miami plots.☆17Updated 5 months ago
- ☆18Updated last week
- A powerful TWAS framework leveraging summary-level reference data☆31Updated 4 months ago
- Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.☆27Updated last week
- ☆29Updated last month
- Summary-level Unified Method for Modeling Integrated Transcriptome☆10Updated 2 years ago
- ☆11Updated 3 years ago
- Estimate genetic correlation using predicted expression☆22Updated 7 years ago
- Integration of TWAS and Colocalization Analysis☆17Updated 9 months ago
- Create Regional Association Plots☆12Updated last year
- Regional association plots☆25Updated last year
- R package for investigating clustered heterogeneity in Mendelian randomization (MR) analyses.☆17Updated 3 years ago
- PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics☆12Updated last year
- Open4Gene, A Hurdle Model-based Method for Peak-to-Gene Linkage Analysis☆12Updated last month
- xQTLbiolinks: a comprehensive and scalable tool for integrative analysis of molecular QTLs☆37Updated 6 months ago
- Assessing enrichment of complex disease or trait associations among QTLs☆15Updated 5 years ago
- ☆19Updated last year
- harmonization, liftover, and imputation of summary statistics from GWAS☆33Updated 4 years ago
- ☆11Updated last year
- S-LDSC scripts for use on MR server.☆10Updated 3 years ago