neurogenomics / MAGMA_CelltypingLinks
Find causal cell-types underlying complex trait genetics
☆88Updated 4 months ago
Alternatives and similar repositories for MAGMA_Celltyping
Users that are interested in MAGMA_Celltyping are comparing it to the libraries listed below
Sorting:
- Expression Weighted Celltype Enrichment. See the package website for up-to-date instructions on usage.☆59Updated 5 months ago
- CELLECT (CELL-type Expression-specific integration for Complex Traits)☆84Updated 11 months ago
- Rapid standardisation and quality control of GWAS or QTL summary statistics☆82Updated 3 weeks ago
- LocusCompareR is a R package with visualization tools for comparing two genetic association datasets.☆115Updated 2 years ago
- Repo for the R package coloc☆169Updated 2 months ago
- ☆79Updated 3 years ago
- Easily download publicly available GWAS summary statistics.☆76Updated last year
- Single Cell Cluster Evaluation☆94Updated 3 years ago
- Visualization of Colocalization Between eQTL and GWAS Data☆84Updated 3 years ago
- ☆35Updated 4 years ago
- Single cell transcriptomics reveals cerebrospinal fluid immune dysregulation during healthy brain aging and cognitive impairment☆27Updated 2 years ago
- Single-Cell ENhancer Target gene mapping using multimodal data with ATAC + RNA☆75Updated 2 months ago
- CELLEX (CELL-type EXpression-specificity)☆43Updated 2 years ago
- ☆48Updated last month
- Linear trajectory inference for single-cell RNA-seq☆59Updated last year
- Create stacked violin plot☆49Updated 3 years ago
- Framework for clustering, phenotyping, pseudotiming and inferring gene regulatory networks from single cell data☆104Updated 2 years ago
- Mouse cell atlas☆60Updated 5 years ago
- Enrichment Networks for Pathway Enrichment Analysis☆55Updated 2 years ago
- ☆28Updated last month
- Single-cell disease relevance score (scDRS)☆141Updated 8 months ago
- Meta-analysis of genomewide association scans☆57Updated 11 months ago
- Pipelines for the analysis of 10x single-cell RNA-sequencing data☆59Updated 2 years ago
- R data package for pre-compiled somatic mutations from TCGA cohorts and CCLE☆95Updated 9 months ago
- A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data☆76Updated 4 months ago
- Contains code to analyze the OneK1K data and perform eQTL mapping of 14 cell types☆32Updated 3 years ago
- PolyFun (POLYgenic FUNctionally-informed fine-mapping)☆120Updated 7 months ago
- A tool for removing doublets from single-cell RNA-seq data☆74Updated 4 years ago
- ☆68Updated 2 years ago
- R interface to the IEU GWAS database API☆96Updated 3 weeks ago