huwenboshi / hess
Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.
☆42Updated 7 years ago
Alternatives and similar repositories for hess:
Users that are interested in hess are comparing it to the libraries listed below
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆48Updated 4 years ago
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆19Updated 2 years ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆31Updated 4 years ago
- ☆19Updated last year
- ☆26Updated 3 years ago
- A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics☆33Updated 3 years ago
- A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.☆28Updated 11 months ago
- Hypothesis Prioritisation in multi-trait Colocalization☆52Updated last year
- ☆35Updated 4 years ago
- A collection of various utilities for GWAS summary statistics☆27Updated 11 months ago
- Colocalization analysis of genetic association signals☆52Updated 5 months ago
- Software for estimating correlation of trait effect sizes across populations☆46Updated 3 weeks ago
- Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.☆24Updated this week
- GWAS for survival analysis in large cohorts☆21Updated 9 months ago
- Regional association plots☆25Updated last year
- R script to make Manhattan-style plot for TWAS☆37Updated 3 years ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆44Updated last year
- Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"☆23Updated 3 years ago
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆31Updated last year
- Regional association plots☆26Updated last year
- A powerful TWAS framework leveraging summary-level reference data☆29Updated last month
- R package for investigating clustered heterogeneity in Mendelian randomization (MR) analyses.☆15Updated 3 years ago
- R script that performs gene-set or gene property analysis using TWAS results.☆31Updated 7 months ago
- GENI plots to visualise results from genome-wide association studies☆27Updated 6 months ago
- ☆32Updated last year
- xQTLbiolinks: a comprehensive and scalable tool for integrative analysis of molecular QTLs☆32Updated 2 months ago
- Analyses conducting GWAS across the UKBB diverse superpopulations☆50Updated 7 months ago
- Genotype-based Prediction (GenoPred)☆72Updated this week
- Partners Biobank genomics data QC☆26Updated 5 years ago
- Harmonise GWAS summary statistics against a reference VCF☆41Updated 3 years ago