Workflow for performing cistrome-wide associations studies
☆11Jul 25, 2022Updated 3 years ago
Alternatives and similar repositories for cwas
Users that are interested in cwas are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Epigenomewide Association Studies (EWAS) with FUnctional Summary-based ImputatiON (FUSION)☆12Mar 24, 2023Updated 3 years ago
- Summary-level Unified Method for Modeling Integrated Transcriptome☆10Jun 27, 2023Updated 3 years ago
- Leveraging functional information to improve GWAS summary statistic imputation☆21Aug 10, 2021Updated 4 years ago
- 🌓 Allele specific analyses across cell states and conditions☆11Nov 28, 2022Updated 3 years ago
- Code to reproduce analysis and figures for 'Genetic mapping of etiologic brain cell types for obesity' (Timshel, eLife 2020)☆14May 20, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- GWAS-TWAS (Transcriptome-wide association study)-Pharmacological library integration pipeline☆20Mar 30, 2021Updated 5 years ago
- ☆11Jan 30, 2025Updated last year
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆43May 2, 2018Updated 8 years ago
- PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics☆12Oct 6, 2023Updated 2 years ago
- ☆26Jan 8, 2026Updated 6 months ago
- Application of the Simple Sum method for testing co-localization of GWAS with any other SNP-level data (e.g. eQTL data)☆10Jan 26, 2026Updated 5 months ago
- Python script for multivariate GWAS meta-analysis☆25Dec 6, 2024Updated last year
- ☆20Aug 7, 2025Updated 11 months ago
- Cross-population analysis using GWAS summary statistics☆20Jun 25, 2024Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- metaUSAT is a data-adaptive statistical approach for testing genetic associations of multiple traits from single/multiple studies using u…☆21May 27, 2021Updated 5 years ago
- hJAM is a hierarchical model which unifies the framework of Mendelian Randomization and Transcriptome-wide association studies.☆11Jan 19, 2024Updated 2 years ago
- Codes for our NPNT paper at Nature Metabolism☆16Feb 9, 2024Updated 2 years ago
- LOGODetect is a powerful tool to identify small segments that harbor local genetic correlation between two traits/diseases.☆29Jul 30, 2025Updated 11 months ago
- This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of mole…☆36Sep 26, 2024Updated last year
- Stratified squared trans-ethnic genetic correlation☆14May 12, 2022Updated 4 years ago
- A collection of various utilities for GWAS summary statistics☆35May 14, 2024Updated 2 years ago
- GPA: Genetic analysis incorporating Pleiotropy and Annotation☆16Feb 27, 2020Updated 6 years ago
- Pleiotropy-informed conditional and conjunctional false discovery rate☆38Jun 3, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- UTMOST (unified test for molecular signatures) is a method for cross-tissue gene expression imputation for transcriptome-wide association…☆46Oct 23, 2025Updated 8 months ago
- Integration of TWAS and Colocalization Analysis☆17Oct 29, 2024Updated last year
- R script to make Manhattan-style plot for TWAS☆43Aug 15, 2021Updated 4 years ago
- Regional association plots☆27Apr 1, 2024Updated 2 years ago
- Partitioning algorithm developed for LAVA☆17May 17, 2024Updated 2 years ago
- A software package for performing and visualising radial multivariable Mendelian randomization analyses☆13Jul 8, 2026Updated last week
- Multi-Trait Genome-Wide Association Analysis☆20Dec 19, 2023Updated 2 years ago
- Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.☆21Aug 19, 2025Updated 11 months ago
- Fast and Efficient Tool to Simulate Summary Statistics from Genome-Wide Association Studies☆12May 21, 2024Updated 2 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Separating the direct effects of risk factors for atherosclerotic cardiovascular disease from those mediated by type 2 diabetes☆17Mar 12, 2023Updated 3 years ago
- SCALLOP-INF analysis☆20Jul 7, 2026Updated 2 weeks ago
- Heritability, genetic correlation and functional enrichment estimation for case-control studies☆19Nov 26, 2023Updated 2 years ago
- ☆56Jan 16, 2025Updated last year
- R package 📦 for handy functions when working with GWAS (summary) data☆17Jul 29, 2019Updated 6 years ago
- A Python package for creating high-quality manhattan and Q-Q plots from GWAS results.☆52Dec 27, 2023Updated 2 years ago
- R wrapper for a Java Bayesian GLM variable selection package☆18Feb 7, 2020Updated 6 years ago