julienroyulaval / DESeq2-MultiBatchLinks
Batch Correction and Adaptive Contrast Calling in Complex RNA-seq Experimental Designs Using DESeq2
☆16Updated last week
Alternatives and similar repositories for DESeq2-MultiBatch
Users that are interested in DESeq2-MultiBatch are comparing it to the libraries listed below
Sorting:
- ☆28Updated last year
- Explore the cancer relevance of your gene list☆52Updated 2 weeks ago
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆25Updated 2 years ago
- Pipeline to analyze long-read mRNA isoforms and ORF products sequenced in breast cancer using PacBio Single-Molecule technology.☆16Updated 3 years ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- ☆20Updated 2 years ago
- Isoform co-usage networks from single-cell RNA-seq data☆16Updated last year
- Inferring gene co-expression networks from single cell gene expression data☆28Updated 3 years ago
- The Spatial Splicing-derived Neoantigen Identifier Pipeline (SSNIP) allows for the precise characterization of neoantigens derived from c…☆20Updated 5 months ago
- Scripts to install as a Bioconda package for making workflows☆17Updated last year
- Docker container for genomics analyses in R.☆25Updated last year
- An R package to analyze single-cell V(D)J data☆28Updated last year
- Peak caller for CUT&TAG data☆29Updated 3 years ago
- Bead-based single-cell atac processing☆33Updated 3 years ago
- Isoform-level functional RNA-Seq analysis 🧬☆26Updated 4 months ago
- ☆25Updated 3 years ago
- SCASA: Single cell transcript quantification tool☆21Updated last year
- Trans-association between HLA and TCR-CDR3☆18Updated 2 years ago
- Analysis and visualization of RNA-Seq results☆30Updated 3 weeks ago
- Workshop • Analysis of RNA-seq data☆36Updated last year
- 🧬 Gene analysis toolkit based on R☆57Updated 9 months ago
- scover☆23Updated last year
- 🧬 🦀 A fast and efficient tool to perform a genome wide Single cell Chromatin State Analysis using multimodal histone modification data.…☆29Updated 4 years ago
- Snakemake pipeline for running MAJIQ☆23Updated last year
- ☆39Updated 3 years ago
- Model-based tumour subclonal deconvolution using population genetics☆33Updated last month
- ☆23Updated 4 years ago
- An Integrated Analysis Pipeline for Unbiased ChIP seq Analysis☆22Updated 11 months ago
- Comprehensive pipeline for donor demultiplexing in single cell☆24Updated last week
- MAnorm2 for Normalizing and Comparing ChIP-seq Samples☆32Updated 2 years ago