julienroyulaval / DESeq2-MultiBatchLinks
Batch Correction and Adaptive Contrast Calling in Complex RNA-seq Experimental Designs Using DESeq2
☆16Updated last week
Alternatives and similar repositories for DESeq2-MultiBatch
Users that are interested in DESeq2-MultiBatch are comparing it to the libraries listed below
Sorting:
- ☆28Updated last year
- Explore the cancer relevance of your gene list☆52Updated 6 months ago
- An R package to analyze single-cell V(D)J data☆28Updated last year
- Scripts to install as a Bioconda package for making workflows☆17Updated last year
- Pipeline to analyze long-read mRNA isoforms and ORF products sequenced in breast cancer using PacBio Single-Molecule technology.☆16Updated 3 years ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- Snakemake pipeline for benchmarking cell-type deconvolution methods and deconvolving real bulk RNA-seq data with the use of scRNA-seq dat…☆15Updated 4 months ago
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆24Updated 2 years ago
- Analysis and visualization of RNA-Seq results☆30Updated last week
- Peak caller for CUT&TAG data☆29Updated 3 years ago
- ☆20Updated 2 years ago
- 🧬 Gene analysis toolkit based on R☆57Updated 8 months ago
- Comprehensive pipeline for donor demultiplexing in single cell☆24Updated last week
- Workshop • Analysis of RNA-seq data☆36Updated last year
- Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment☆22Updated 2 months ago
- Docker container for genomics analyses in R.☆25Updated last year
- Harvard FAS informatics scRNAseq workshop website☆38Updated 6 years ago
- Easy and comprehensive biological network reconstruction and analysis☆32Updated this week
- The Spatial Splicing-derived Neoantigen Identifier Pipeline (SSNIP) allows for the precise characterization of neoantigens derived from c…☆20Updated 5 months ago
- Single-cell RNA Processing Software☆11Updated 2 months ago
- SCASA: Single cell transcript quantification tool☆21Updated last year
- R package for Flexible dot plots☆29Updated 3 years ago
- MAnorm2 for Normalizing and Comparing ChIP-seq Samples☆32Updated 2 years ago
- workshop website on readthedocs☆19Updated 2 weeks ago
- ☆25Updated 3 years ago
- Inference of TCR motifs☆32Updated 2 months ago
- Snakemake pipeline for running MAJIQ☆23Updated last year
- Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.☆57Updated last year
- R vignettes for processing BUS format single-cell RNA-seq files☆20Updated 5 years ago
- Trans-association between HLA and TCR-CDR3☆18Updated 2 years ago