ProGenNo / ProHapLinks
Proteogenomics database-generation tool for protein haplotypes and variants
☆11Updated 7 months ago
Alternatives and similar repositories for ProHap
Users that are interested in ProHap are comparing it to the libraries listed below
Sorting:
- PepQuery: a targeted peptide search engine☆14Updated last year
- TFregulomeR reveals transcription factors’ context-specific features and functions☆15Updated 3 years ago
- NeoFuse is a user-friendly pipeline for the prediction of fusion neoantigens from tumor RNA-seq data.☆20Updated 3 years ago
- ☆18Updated last year
- R package for nucleotide conversion sequencing data analysis☆16Updated 3 weeks ago
- A Nextflow pipeline to align, merge, and organize large PhIP-Seq datasets☆12Updated last year
- BANDITS: Bayesian ANalysis of DIfferenTial Splicing☆19Updated 4 months ago
- single-cell analysis workflows for double phosphoramidite barcode and UMI Correction (scCOLOR-seq)☆13Updated 2 years ago
- ORF Quantification pipeline for Alternative Splicing☆16Updated 4 years ago
- The KEGGgraph package to parse KEGG pathways in R into graph objects☆14Updated 9 months ago
- R-package to perform metabolomics pre-processing, differential metabolite analysis, metabolite clustering and custom visualisations.☆17Updated last week
- The official repository for the deepSNV bioconductor packages. Branch master tracks the official Bioconductor development branch.☆17Updated 3 years ago
- The `multiGSEA` R package was designed to run a robust GSEA-based pathway enrichment for multiple omics layers.☆21Updated 3 months ago
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆41Updated 3 years ago
- Smooth-quantile Normalization Adaptation for Inference of co-expression Links☆16Updated 2 years ago
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.☆29Updated 4 years ago
- Detecting Aberrant Splicing Events from RNA-sequencing data☆16Updated last year
- ☆29Updated 2 years ago
- A comprehensive gene set function enrichment tool for multiple species.☆14Updated 5 years ago
- 🐶 hlabud: HLA genotype analysis in R☆17Updated 9 months ago
- A web-based application to perform Over-Representation Analysis (ORA) using clusterProfiler and shiny R libraries☆12Updated 6 years ago
- omics data analysis using clusterProfiler ;)☆15Updated last year
- ☆32Updated 2 years ago
- interactive plots for differential expression analysis☆34Updated 7 months ago
- ☆12Updated 5 years ago
- Bioinformatics Pipeline☆12Updated 3 years ago
- scpca-nf is the Nextflow workflow for processing Single-cell Pediatric Cancer Atlas Portal data☆13Updated this week
- A tool for large scale omics datasets evaluation☆23Updated 2 years ago
- An r package for proteomics data Analysis, developed from DEP.☆34Updated 10 months ago
- An integrated analysis toolkit and pipeline for Next-Generation Sequencing (NGS) panel sequencing data☆14Updated 7 years ago