AllenInstitute / mouse_aging_scRNAseqLinks
analysis scripts related to Jin et al manuscript on scRNA seq in aging mouse brain
☆19Updated last year
Alternatives and similar repositories for mouse_aging_scRNAseq
Users that are interested in mouse_aging_scRNAseq are comparing it to the libraries listed below
Sorting:
- Aligning gene expression trajectories of single-cell reference and query systems☆73Updated 9 months ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆29Updated 8 months ago
- ☆26Updated last week
- iterative clustering pipeline of big single cell datasets.☆33Updated 3 months ago
- ☆55Updated last month
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆26Updated 5 months ago
- Spatial transcriptomics of heart tissue☆22Updated 3 years ago
- ☆18Updated 5 months ago
- ☆58Updated last year
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆31Updated last year
- Calculation of Reference/Cluster Similarity Spectrum (RSS/CSS)☆32Updated last year
- R implementation of GeneTrajectory☆62Updated last year
- CellANOVA: Cell State Space Analysis of Variance for signal recovery in single cell batch integration☆49Updated 9 months ago
- Functional Inference of Gene Regulation☆46Updated last year
- ☆10Updated 2 years ago
- Integration of gut cell atlases☆27Updated 5 months ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆32Updated 8 months ago
- Collection of scripts for analysis of pan fetal immune atlas☆27Updated 2 years ago
- Computational pipeline to process EasySci-RNA data.☆21Updated last year
- Functions for single cell data analysis☆32Updated 4 years ago
- ☆22Updated 2 years ago
- The Cornell Single-Cell Muscle Project (scMuscle) aims to collect, analyze and provide to the research community skeletal muscle transcri…☆22Updated 2 years ago
- R package IReNA☆28Updated 8 months ago
- AD regulome analysis☆12Updated 2 years ago
- ☆21Updated last year
- Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)☆16Updated 2 years ago
- Ordering gene-expression and functional events in single-cell experiments☆22Updated last year
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 9 months ago
- MERCI for tracing of mitochondrion transfer between single cancer and T cells☆22Updated last year
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆37Updated 4 years ago