Alternatives and similar repositories for Bactabolize:

Users that are interested in Bactabolize are comparing it to the libraries listed below

• Kalan-Lab / lsaBGC
  lsaBGC - Lineage Specific Analysis of Biosynthetic Gene Clusters
  ☆37Updated 5 months ago
• zreitz / multismash
  A workflow and scripts for large-scale antiSMASH analyses
  ☆33Updated 3 weeks ago
• cjneely10 / MetaSanity
  Pipeline for major biological analyses.
  ☆34Updated 2 years ago
• Kalan-Lab / zol
  zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)
  ☆51Updated last month
• deprekate / PHANOTATE
  PHANOTATE: a tool to annotate phage genomes.
  ☆71Updated last month
• adamhockenberry / bacphlip
  A python library for predicting phage lifestyle based on genome sequence
  ☆35Updated last year
• ku-cbd / PhageBoost
  Rapid discovery of novel prophages using biological feature engineering and machine learning
  ☆36Updated 3 weeks ago
• nselem / corason
  Bioinformatic Tools for study Evolution of metabolic diversity
  ☆31Updated 10 months ago
• EBI-Metagenomics / mettannotator
  ☆57Updated 3 weeks ago
• apcamargo / prodigal-gv
  A fork of Prodigal meant to improve gene calling for giant viruses and viruses that use alternative genetic codes
  ☆32Updated last year
• susiegriggo / Phynteny
  Predict the function of phage hypothetical proteins using an LSTM model trained with Phage Synteny
  ☆43Updated last month
• XiaofangJ / PhaseFinder
  A pipeline to computationally identify invertible DNA regions and quantify their orientations.
  ☆28Updated last year
• microbial-pangenomes-lab / microGWAS
  Bacterial GWAS analysis
  ☆34Updated last month
• apcamargo / ictv-mmseqs2-protein-database
  ☆25Updated 11 months ago
• gatech-genemark / MetaGeneMark-2
  MetaGeneMark-2: Improved Gene Prediction in Metagenomes
  ☆18Updated 9 months ago
• xinehc / melon
  Melon: metagenomic long-read-based taxonomic identification and quantification using marker genes
  ☆34Updated last month
• functional-dark-side / agnostos-wf
  ☆44Updated last year
• endixk / ezaai
  EzAAI - High Throughput Prokaryotic AAI Calculator
  ☆37Updated 3 months ago
• michaelkyu / PlasX
  PlasX, a machine learning classifier for identifying plasmid sequences based on genetic architecture
  ☆31Updated 2 years ago
• franciscozorrilla / SymbNET
  Teaching materials for SymbNET course: from MAGs to GEMs
  ☆13Updated last year
• valdeanda / mebs
  Protocol for finding informative protein families and then using them to score omic samples
  ☆18Updated 2 years ago
• AnantharamanLab / PropagAtE
  Prophage Activity Estimator
  ☆26Updated 7 months ago
• Yasas1994 / Jaeger
  Jaeger is a quick and precise tool for detecting phages in sequence assemblies.
  ☆25Updated 2 months ago
• CCB-SB / plsdb
  PLSDB pipeline to collect bacterial plasmids from NCBI
  ☆37Updated 2 months ago
• brinkmanlab / islandpath
  IslandPath standalone software
  ☆31Updated last year
• EBI-Metagenomics / EukCC
  Tool to estimate genome quality of microbial eukaryotes
  ☆35Updated this week
• Gibbons-Lab / pipelines
  Pipelines used in the lab.
  ☆11Updated 3 months ago
• RasmussenLab / phamb
  Downstream processing of VAMB binning for Viral Elucidation
  ☆47Updated 6 months ago
• MattiaPandolfoVR / MetaPhage
  ☆37Updated last year
• lauriebelch / SOCfinder
  ☆16Updated last month