the Metagenomic test for Presence Or Absence of Pathways
☆13Mar 4, 2019Updated 7 years ago
Alternatives and similar repositories for MetaPOAP
Users that are interested in MetaPOAP are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ALDEx tool to examine compositional high-throughput sequence data with Welch's t-test☆15Mar 7, 2019Updated 7 years ago
- Improving genome bins through the combination of different binning programs☆31Jan 30, 2023Updated 3 years ago
- Profiler for metagenomics based on NGLess☆13Feb 22, 2024Updated 2 years ago
- Microbial community-scale metabolic modeling predicts personalized short-chain-fatty-acid production profiles in the human gut☆10Jun 25, 2024Updated last year
- Fast and accurate Average Genome Size and 16S rRNA gene Average Copy Number computation in metagenomic data☆16Dec 20, 2024Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Metagenomic binning suite☆29Sep 30, 2022Updated 3 years ago
- Sample Metadata Curation for curatedMetagenomicData☆31Jun 2, 2026Updated last week
- From genomes to phenotypes: Traitar3, the microbial trait analyzer (for Python3)☆22Jul 8, 2024Updated last year
- Assign taxonomic ranks based on evolutionary divergence.☆23Mar 3, 2026Updated 3 months ago
- MUSiCC: A marker genes based framework for metagenomic normalization and accurate profiling of gene abundances in the microbiome☆17Nov 7, 2019Updated 6 years ago
- Pipeline for major biological analyses.☆35Mar 30, 2022Updated 4 years ago
- Kyoto Encylopedia of Genes and Genomes (KEGG) NetworkX Topological parser automates downloading, parsing, and converting from a KEGG Mark…☆12May 8, 2024Updated 2 years ago
- ☆15Dec 8, 2022Updated 3 years ago
- viralComplete: BLAST-based viral completeness verification☆23Oct 4, 2021Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Scalable creating/updating of metagenome profiling databases☆62Jun 25, 2025Updated 11 months ago
- ☆13Nov 28, 2018Updated 7 years ago
- AMBER: Assessment of Metagenome BinnERs☆33Apr 14, 2026Updated last month
- Extremely accurate algorithm used to group DNA sequences from microbial communities into operational taxonomic units (proxy for species) …☆14Nov 20, 2018Updated 7 years ago
- MetaPathways v2.0: A master-worker model for environmental Pathway/Genome Database construction on grids and clouds☆33Nov 26, 2015Updated 10 years ago
- A toolbox for improving metagenome-assembled genomes.☆64Jun 2, 2021Updated 5 years ago
- Functions for compositional analysis of high throughput sequencing☆29Dec 8, 2023Updated 2 years ago
- ☆18Nov 7, 2025Updated 7 months ago
- R interface to Chemical Translation Service (CTS)☆17Jul 27, 2024Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- VirHostMatcher-Net: A network-based computational tool for predicting virus-host interactions.☆19Mar 8, 2026Updated 3 months ago
- ☆15Apr 1, 2024Updated 2 years ago
- MiGA: Microbial Genomes Atlas☆33May 26, 2026Updated 2 weeks ago
- Indexing & querying large assembly graphs -- in space, no one can hear you miao!☆120Jan 29, 2026Updated 4 months ago
- Open prediction of Polysaccharide Utilisation Loci (PUL)☆26Apr 22, 2020Updated 6 years ago
- Random snippets based on tensorflow☆10Jan 22, 2016Updated 10 years ago
- Pipeline to apply encoded Kmer analysis to protein sequences☆16May 15, 2026Updated 3 weeks ago
- Virus Identification By iteRative ANnoTation☆196Apr 15, 2024Updated 2 years ago
- High-resolution strain-level microbiome composition analysis tool based on reference genomes and k-mers☆44Apr 8, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- The Microbiome Interpretable Temporal Rule Engine☆46May 26, 2021Updated 5 years ago
- R markdown documents copied from other folders on Dec 15th 2021☆14Nov 4, 2025Updated 7 months ago
- Client-side REST access to KEGG☆15Apr 29, 2026Updated last month
- Ley Lab MetaGenome Profiler DataBase generator☆48Nov 9, 2022Updated 3 years ago
- Homebrew tap for formulae to build ARB (http://www.arb-home.de) and related software.☆14May 22, 2026Updated 2 weeks ago
- Ancestral Sequence Reconstruction in Python☆15May 9, 2019Updated 7 years ago
- The KEGGgraph package to parse KEGG pathways in R into graph objects☆16Apr 14, 2025Updated last year