Multiomics-Analytics-Group / vuegenLinks
VueGen automates the creation of reports from bioinformatics outputs, supporting formats like PDF, HTML, DOCX, ODT, PPTX, Reveal.js, Jupyter notebooks, and Streamlit web applications. Users simply provide a directory with output files and VueGen compiles them into a structured report.
☆37Updated 2 weeks ago
Alternatives and similar repositories for vuegen
Users that are interested in vuegen are comparing it to the libraries listed below
Sorting:
- Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake☆30Updated last year
- sangerseq_viewer is a python package to automatically visualize Sanger sequencing results and the corresponding annotated sequence map.☆40Updated last year
- Comprehensive Python client for the Uniprot REST API☆55Updated 4 months ago
- A bioinformatics best-practice analysis pipeline for epitope prediction and annotation☆51Updated this week
- ☆78Updated last year
- Various bioinformatics tutorials☆62Updated 2 years ago
- Find common blocks and differences between DNA sequences☆42Updated 3 months ago
- Making bioinformatics fun again☆74Updated 2 months ago
- Python introduction for life scientists☆46Updated 9 months ago
- Identify and quantify MHC eluted peptides from mass spectrometry raw data☆44Updated 2 weeks ago
- A command line tool to identify and annotate small proteins in microbial sequencing datasets.☆25Updated 2 years ago
- Open source short linear motif discovery and sequence analysis☆25Updated last year
- MetaLogo: a heterogeneity-aware sequence logo generator and aligner☆21Updated 2 years ago
- autoprot provides standardised, fast, and reliable proteomics data analysis while ensuring a high customisability needed to tailor the an…☆10Updated 2 weeks ago
- Interactive tutorials for using scikit-bio in biological research☆62Updated 5 months ago
- EditR: an algorithm for simple and cost effective measurement of base editing by quantifying Sanger trace fluorescence☆33Updated 2 years ago
- Just a collection of (often poor) scripts to do various bits of bioinformatics stuff I find myself needing to do.☆63Updated 5 years ago
- MicrobeRX☆15Updated 6 months ago
- Parse GFF3 into Pandas dataframes☆30Updated last year
- A set of Shiny apps to provide interactive enrichment analysis and exploration of results.☆31Updated 3 weeks ago
- A Python module to analyze Sanger sequencing results.☆24Updated 2 years ago
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆38Updated last year
- R tool to analyse and integrate multiple -omics data☆15Updated last month
- Fast and flexible ORF finder☆78Updated 4 years ago
- Metagenome analysis using the Kraken software suite☆36Updated 3 years ago
- A quick and easy way to download the genomes/predicted proteins of taxa available in JGI's Genome Portal.☆38Updated 8 months ago
- Flexible analysis of high-content CRISPR screening☆31Updated 5 months ago
- Example genomics data for tool developers☆117Updated last year
- scripts for predicting natural product activity from biosynthetic gene cluster sequences☆24Updated 4 months ago
- From metagenomes to epitopes and beyond☆12Updated this week