Alternatives and similar repositories for FrameDiPT

Users that are interested in FrameDiPT are comparing it to the libraries listed below

• Wangchentong / Proteus
  Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.
  ☆82Updated last year
• anton-bushuiev / PPIformer
  Learning to design protein-protein interactions with enhanced generalization (ICLR 2024)
  ☆49Updated 3 weeks ago
• AstraZeneca / DiffAbXL
  The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…
  ☆86Updated 4 months ago
• alexechu / protpardelle
  ☆65Updated 2 years ago
• shuyana / DiffusionProteinLigand
  ☆78Updated last year
• kirjner / GGS
  This repository implements Gibbs sampling with Graph-based Smoothing
  ☆39Updated last year
• pengzhangzhi / ab_opt
  Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.
  ☆60Updated 2 years ago
• BioinfoMachineLearning / DIPS-Plus
  The Enhanced Database of Interacting Protein Structures for Interface Prediction
  ☆50Updated 2 months ago
• Graylab / GeoDock
  Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.
  ☆98Updated last year
• dakpinaroglu / Frame2seq
  Structure-conditioned masked language modeling for protein sequence design
  ☆69Updated last year
• bjornwallner / alphafoldv2.2.0
  Open source code for AlphaFold.
  ☆39Updated 2 years ago
• HannesStark / boltzgen
  ☆302Updated this week
• richardshuai / fampnn
  Sidechain conditioning and modeling for full-atom protein sequence design
  ☆124Updated 4 months ago
• stebliankin / piston
  Evaluating Protein Binding Interfaces with Transformer Networks
  ☆47Updated 2 years ago
• BioinfoMachineLearning / ATOMRefine
  3D equivariant graph transformer for all-atom refinement of protein tertiary structures
  ☆27Updated 2 years ago
• jproney / AF2Rank
  ☆113Updated 2 years ago
• evo-design / protein-dpo
  Aligning protein generative models with experimental fitness
  ☆108Updated last week
• WillHua127 / EnzymeFlow
  Official repository of EnzymeFlow
  ☆94Updated 10 months ago
• iambic-therapeutics / np-bench
  A benchmark for 3D biomolecular structure prediction models
  ☆66Updated 5 months ago
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆56Updated 5 months ago
• wengong-jin / abdockgen
  ☆107Updated 2 years ago
• compsciencelab / mdCATH
  This repository houses all the scripts and notebooks utilized for generating, analyzing, and validating the mdCATH dataset. Some user ex…
  ☆49Updated 11 months ago
• Profluent-AI / progen3
  Public Release of ProGen3 family of Models
  ☆81Updated 3 months ago
• Immortals-33 / Scaffold-Lab
  A comprehensive benchmark on the performances of multiple protein backbone generative models.
  ☆64Updated 5 months ago
• wengong-jin / DSMBind
  ☆94Updated last year
• lujiarui / Str2Str
  Codebase of the paper "Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling" (ICLR 2024)
  ☆78Updated last year
• TencentAI4S / HuDiff
  Code for humanization of antibody and nanobody
  ☆58Updated 2 months ago
• patrickbryant1 / Cfold
  Structure prediction of alternative protein conformations
  ☆80Updated 8 months ago
• Profluent-Internships / MMDiff
  Joint Sequence-Structure Generation of Nucleic Acid and Protein Complexes with SE(3)-Discrete Diffusion
  ☆58Updated last year
• DeepGraphLearning / S3F
  Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)
  ☆45Updated 10 months ago