FrameDiPT: an SE(3) diffusion model for protein structure inpainting
☆60Apr 13, 2026Updated 2 months ago
Alternatives and similar repositories for FrameDiPT
Users that are interested in FrameDiPT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- LightMHC: A Light Model for pMHC Structure Prediction with Graph Neural Networks☆12Jan 9, 2024Updated 2 years ago
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆90Jun 23, 2024Updated 2 years ago
- Source code for RNA-FrameFlow: SE(3) Flow Matching for 3D RNA Backbone Design☆100Oct 15, 2025Updated 8 months ago
- Fast protein backbone generation with SE(3) flow matching.☆326Jul 19, 2024Updated last year
- ☆30Aug 26, 2025Updated 10 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Implementation for SE(3) diffusion model with application to protein backbone generation☆424Jul 3, 2023Updated 2 years ago
- Reference implmentation of Diffusion models on SO(3)☆31Mar 1, 2022Updated 4 years ago
- Official repository for DiffPepBuilder and DiffPepDock tools☆127Oct 24, 2025Updated 8 months ago
- FoldFlow: SE(3)-Stochastic Flow Matching for Protein Backbone Generation☆291Dec 10, 2024Updated last year
- A geometric flow matching model for generative protein-ligand docking and affinity prediction. (ISMB 2025)☆138Sep 3, 2025Updated 9 months ago
- Aligning protein generative models with experimental fitness☆124Mar 12, 2026Updated 3 months ago
- ☆231Mar 2, 2024Updated 2 years ago
- Code and software used to design de novo protein nanomachines. Supplementary material for "Computational design of nanoscale rotational m…☆10Mar 19, 2022Updated 4 years ago
- Convert coarse-grained protein structure to all-atom model☆58Jun 7, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆12May 16, 2020Updated 6 years ago
- Sidechain conditioning and modeling for full-atom protein sequence design☆142Nov 11, 2025Updated 7 months ago
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆38Nov 7, 2024Updated last year
- A LLM-friendly framework for translating dynamical equations to gymnasium-compatible RL environments.☆33Mar 18, 2026Updated 3 months ago
- 3D equivariant graph transformer for all-atom refinement of protein tertiary structures☆29Jun 21, 2023Updated 3 years ago
- Structure-conditioned masked language modeling for protein sequence design☆73Jan 31, 2024Updated 2 years ago
- ☆97Oct 14, 2025Updated 8 months ago
- In-silico design pipeline for evaluating protein structure diffusion models.☆31Jun 25, 2024Updated 2 years ago
- De Novo Protein Design by Equivariantly Diffusing Oriented Residue Clouds☆188Apr 21, 2024Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆32Feb 5, 2025Updated last year
- ☆31Oct 7, 2025Updated 8 months ago
- Code for humanization of antibody and nanobody☆88Aug 28, 2025Updated 10 months ago
- ☆142Jun 3, 2025Updated last year
- ☆47Sep 16, 2024Updated last year
- ☆118Jan 3, 2026Updated 5 months ago
- ☆22Oct 4, 2022Updated 3 years ago
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity☆13Jul 9, 2025Updated 11 months ago
- Scoring methods for predicting the DDG upon protein mutation☆17Feb 20, 2023Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Protein-ligand structure prediction☆240Jul 31, 2025Updated 11 months ago
- ☆21Oct 22, 2024Updated last year
- Geometric Algebra Flow Matching (GAFL) for Protein Backbone Generation☆20May 5, 2026Updated last month
- Deep learning prediction of protein residue-residue distances☆23Jun 28, 2022Updated 4 years ago
- Protein structure diffusion model for unconditional protein generation and motif scaffolding☆193Jun 24, 2024Updated 2 years ago
- Official implementation of "Learning the language of protein structures"☆42Mar 18, 2026Updated 3 months ago
- Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language models☆63Feb 3, 2026Updated 4 months ago