Alternatives and similar repositories for protpardelle-1c

Users that are interested in protpardelle-1c are comparing it to the libraries listed below

• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆60Updated 7 months ago
• bene837 / af2seq
  ☆46Updated last year
• liuyf020419 / SCUBA-D
  ☆61Updated last year
• Kuhlman-Lab / ThermoMPNN-D
  Extension of ThermoMPNN for double mutant predictions
  ☆51Updated 3 months ago
• mjendrusch / salad
  protein structure generation with sparse all-atom denoising models
  ☆54Updated last month
• TencentAI4S / HuDiff
  Code for humanization of antibody and nanobody
  ☆68Updated 4 months ago
• KULL-Centre / _2024_cagiada_stability
  ☆72Updated 9 months ago
• petergroth / kermut
  This is the official code repository for the paper NeurIPS 2024 spotlight paper "Kermut: Composite kernel regression for protein variant …
  ☆42Updated 5 months ago
• HannesStark / CodonMPNN
  ☆30Updated last year
• LBM-EPFL / CARBonAra
  Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…
  ☆46Updated 2 months ago
• Kuhlman-Lab / alphafold3
  Kuhlman Lab Installation of AlphaFold3
  ☆37Updated 3 months ago
• KULL-Centre / _2023_Blaabjerg_SSEmb
  ☆39Updated last year
• ShenLab / SeqDance
  code for SeqDance/ESMDance, biophysics-informed protein language models
  ☆41Updated 9 months ago
• Bitbol-Lab / rag-esm
  RAG-ESM is a retrieval-augmented framework that allows to condition pretrained ESM2 protein language models on homologous sequences
  ☆27Updated 4 months ago
• danny305 / StabilityOracle
  ☆29Updated 3 months ago
• bwicky / oligomer_hallucination
  ☆37Updated 2 years ago
• wallnerlab / AFsample2
  Modelling protein conformational landscape with Alphafold
  ☆54Updated 4 months ago
• adaptyvbio / competition_metrics
  Metrics for our protein design competitions.
  ☆35Updated last year
• PKUliujl / GeoSeqBuilder
  ☆32Updated 11 months ago
• cryoEM-CNIO / BinderFlow
  Code for running BinderFlow
  ☆55Updated last month
• data2code / afpdb
  Efficient manipulation of protein structures in Python
  ☆61Updated 3 months ago
• iambic-therapeutics / np-bench
  A benchmark for 3D biomolecular structure prediction models
  ☆67Updated 8 months ago
• Profluent-AI / E1
  Profluent-E1 family of Protein Encoder Models
  ☆98Updated last month
• RosettaCommons / AF2_peptide_hallucination
  Code for designing binders to flexible peptides with AlphaFold2 Hallucination
  ☆28Updated 2 years ago
• luo-group / MODIFY
  ML-optimized library design with improved fitness and diversity for protein engineering
  ☆36Updated 2 months ago
• kiharalab / Distance-AF
  Public version for Distance-AF
  ☆30Updated 5 months ago
• meilerlab / HyperMPNN
  HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles
  ☆69Updated 6 months ago
• ohuelab / Solubility_AfDesign
  Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol
  ☆33Updated 2 years ago
• Gonglab-THU / GDFold2
  ☆17Updated last year
• sokrypton / af2bind
  ☆54Updated last month