LPDI-EPFL / RosettaSurf
☆13Updated 3 years ago
Alternatives and similar repositories for RosettaSurf
Users that are interested in RosettaSurf are comparing it to the libraries listed below
Sorting:
- Implementation of Protein Invariant Point Packer (PIPPack)☆32Updated 11 months ago
- De novo design of small molecule binding sites into proteins☆12Updated 4 years ago
- Tutorial files☆11Updated 9 months ago
- Modelling protein conformational landscape with Alphafold☆48Updated this week
- Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…☆16Updated 3 years ago
- ☆19Updated 2 years ago
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆39Updated 11 months ago
- Rosetta FunFolDes – a general framework for the computational design of functional proteins.☆19Updated 6 years ago
- A Motif Hash Based Method for Matching Crosslinkers into Peptides and Proteins☆18Updated last year
- protein structure generation with sparse all-atom denoising models☆30Updated 2 weeks ago
- ☆35Updated last year
- What exactly are the non-canonical amino acids in the Rosetta database folder?☆11Updated 5 years ago
- Some scripts that I keep using over and over.☆18Updated 4 months ago
- Code for designing binders to flexible peptides with AlphaFold2 Hallucination☆22Updated last year
- an ultra-fast and accurate program for deterministic protein sidechain packing☆30Updated 2 months ago
- DLPacker☆31Updated 8 months ago
- Some Rosetta Scripts that allow for various simple tasks☆14Updated 5 years ago
- code for SeqDance/ESMDance, biophysics-informed protein language models☆34Updated last month
- Generative diverse protein backbones by protein language model☆31Updated 5 months ago
- a fast and accurate physical energy function extended from EvoEF for protein sequence design☆29Updated 2 years ago
- This repository contains the AlphaCutter.py for the removal of non-globular regions from predicted protein structures.☆15Updated last year
- Protein Sequence Evolutionary Information Language Model☆12Updated last year
- ☆31Updated last year
- A variational autoencoder that directly generates the 3D coordinates of immunoglobulin protein backbones.☆28Updated 2 years ago
- ☆32Updated last year
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆33Updated 6 months ago
- An open-source platform for developing protein models beyond AlphaFold.☆11Updated 3 weeks ago
- Extract ligand binding sites from PDB. Match the binding sites to de novo scaffolds.☆11Updated 4 years ago
- Scripts and data deposition for de novo heterodimers manuscript☆11Updated 6 years ago
- ☆37Updated last year