LPDI-EPFL / RosettaSurfLinks
☆15Updated 4 years ago
Alternatives and similar repositories for RosettaSurf
Users that are interested in RosettaSurf are comparing it to the libraries listed below
Sorting:
- De novo design of small molecule binding sites into proteins☆12Updated 4 years ago
- What exactly are the non-canonical amino acids in the Rosetta database folder?☆12Updated 5 years ago
- Modelling protein conformational landscape with Alphafold☆54Updated 4 months ago
- Rosetta FunFolDes – a general framework for the computational design of functional proteins.☆21Updated 6 years ago
- Protein Sequence Evolutionary Information Language Model☆13Updated 2 years ago
- Protein design and sculpting using Rosetta and Deep learning methods (RFDiff and Alphafold2)☆44Updated 3 months ago
- Implementation of Protein Invariant Point Packer (PIPPack)☆35Updated last year
- Some scripts that I keep using over and over.☆21Updated 5 months ago
- Tutorial files☆12Updated last year
- Automatic Retrieval and ClusTering of Interfaces in Complexes from 3D structural information☆32Updated 3 weeks ago
- This repository contains the AlphaCutter.py for the removal of non-globular regions from predicted protein structures.☆16Updated 2 years ago
- Updated Protpardelle models with more robust motif scaffolding and multichain support☆56Updated 2 weeks ago
- ☆36Updated 2 years ago
- ☆20Updated 3 years ago
- Boltzmann-ranked alternative protein conformations from reduced-MSA AlphaFold2☆59Updated last month
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆57Updated 7 months ago
- Fold Conditioned protein design pipeline based on AF2Multimer Hallucination☆46Updated 3 weeks ago
- Physical energy function for protein sequence design☆34Updated 2 years ago
- Scores for Hydrophobicity and Charges based on SASAs☆40Updated 6 months ago
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆42Updated last year
- ☆26Updated 4 months ago
- ☆37Updated 2 years ago
- Neural Iterative Selection-Expansion using LigandMPNN/LASErMPNN and Boltz-2x☆29Updated last week
- Binding pocket optimization based on force fields and docking scoring functions☆37Updated 9 months ago
- DiffDock implementation that adds support for HPC execution using Slurm and Singularity☆26Updated 7 months ago
- ☆15Updated 3 months ago
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆35Updated last year
- ☆13Updated 2 years ago
- A benchmark for 3D biomolecular structure prediction models☆67Updated 7 months ago
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆33Updated 2 years ago