Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity
☆14Jul 9, 2025Updated last year
Alternatives and similar repositories for Graphinity
Users that are interested in Graphinity are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Inpainting protein sequence and structure☆13Nov 10, 2023Updated 2 years ago
- Antigen-receptor Design Against Peptide-MHC Targets☆22Jan 9, 2026Updated 8 months ago
- KA-Search: Rapid and exhaustive sequence identity search of known antibodies☆23Jul 9, 2024Updated 2 years ago
- Fast, gene-specific joint humanisation of antibody heavy and light chains.☆27Nov 11, 2025Updated 10 months ago
- Humanness of de-novo designed proteins☆47May 19, 2025Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- AlphaBind code + model accompanying pre-print☆94Jul 24, 2025Updated last year
- ☆12Dec 2, 2024Updated last year
- Code and software used to design de novo protein nanomachines. Supplementary material for "Computational design of nanoscale rotational m…☆10Mar 19, 2022Updated 4 years ago
- Code for designing binders to flexible peptides with AlphaFold2 Hallucination☆30Dec 21, 2023Updated 2 years ago
- ☆27Apr 10, 2025Updated last year
- Evaluating Protein Binding Interfaces with Transformer Networks☆46Oct 24, 2023Updated 2 years ago
- Machine learning-driven antibody design☆65Jul 5, 2023Updated 3 years ago
- ☆15Mar 28, 2025Updated last year
- A language model suite for numbering antigen receptor sequences.☆64Updated this week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Biomolecular co-folding, binder filtering, and nanobody design☆91Jun 28, 2026Updated 2 months ago
- Fold Conditioned protein design pipeline based on AF2Multimer Hallucination☆55Jun 22, 2026Updated 2 months ago
- ☆47Sep 16, 2024Updated 2 years ago
- Propose CDR single-point mutations that rescue antibody expression without disrupting antigen binding, using bound vs. unbound ProteinMPN…☆15May 26, 2026Updated 3 months ago
- ☆18Mar 19, 2026Updated 6 months ago
- PyPEF – Pythonic Protein Engineering Framework☆16Sep 13, 2026Updated last week
- The MULTICOM protein structure system. This repository includes the source code and documents of both template-based and template-free mo…☆17Nov 2, 2021Updated 4 years ago
- ☆28Sep 1, 2026Updated 2 weeks ago
- Explore protein fold space with deep generative models☆16Aug 5, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A structure checker in python☆27Nov 25, 2024Updated last year
- ☆27May 16, 2023Updated 3 years ago
- ☆11May 22, 2024Updated 2 years ago
- Design a local part of a protein☆20Jan 12, 2023Updated 3 years ago
- ☆16Jun 11, 2021Updated 5 years ago
- ☆57Apr 1, 2025Updated last year
- ☆13Mar 28, 2025Updated last year
- Improved antibody structure-based design using inverse folding☆176Dec 9, 2025Updated 9 months ago
- ☆17Sep 26, 2025Updated 11 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- An open-source Rust implementation of Shape Complementarity (SC)☆20Oct 2, 2025Updated 11 months ago
- Code for AlphaFold Distillation for Protein Design☆28Sep 18, 2025Updated last year
- Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…☆16Oct 27, 2021Updated 4 years ago
- BC-Design: A Biochemistry-Aware Framework for High-Precision Inverse Protein Folding https://www.biorxiv.org/content/10.1101/2024.10.28.6…☆22Nov 24, 2025Updated 9 months ago
- Rosetta FunFolDes – a general framework for the computational design of functional proteins.☆20Apr 12, 2019Updated 7 years ago
- Absolve antibody variable domain sequence analysis☆18Sep 13, 2018Updated 8 years ago
- An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.☆26Mar 21, 2024Updated 2 years ago