Geometric Algebra Flow Matching (GAFL) for Protein Backbone Generation
☆19May 5, 2026Updated last month
Alternatives and similar repositories for gafl
Users that are interested in gafl are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Fast protein backbone flexibility prediction model☆35Jan 4, 2026Updated 5 months ago
- Learnable Global Pooling Layers Based on Regularized Optimal Transport (ROT)☆16Mar 17, 2024Updated 2 years ago
- Flexibility-conditioned protein structure design☆36Mar 10, 2026Updated 3 months ago
- mmCIF-based extension dictionary for computed structure models☆24Feb 5, 2026Updated 4 months ago
- "Applying Regularized Schrödinger-Bridge-Based Stochastic Process in Generative Modeling"☆11Aug 16, 2022Updated 3 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Codebase of the paper "Aligning Protein Conformation Ensemble Generation with Physical Feedback" (ICML 2025)☆18Jul 6, 2025Updated 11 months ago
- Code for deep learning guided design of dynamic proteins☆33Jul 16, 2024Updated last year
- Disordered protein ensemble prediction☆14Jun 11, 2026Updated last week
- [ACMMM 2024] An Inverse Partial Optimal Transport Framework for Music-guided Movie Trailer Generation☆16Mar 15, 2025Updated last year
- Benchmarking code accompanying the release of `bioemu`☆63Jun 5, 2026Updated last week
- Source code for RNA-FrameFlow: SE(3) Flow Matching for 3D RNA Backbone Design☆100Oct 15, 2025Updated 8 months ago
- ☆18Oct 5, 2024Updated last year
- A machine learned Molecular Mechanics force field with integration into GROMACS and OpenMM☆62May 11, 2026Updated last month
- [ICML2025] The official implementation of "PolyConf: Unlocking Polymer Conformation Generation through Hierarchical Generative Models"☆35Mar 18, 2026Updated 3 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A flow matching model for generating conformational ensembles of protein backbones.☆45May 22, 2026Updated 3 weeks ago
- ☆13Apr 1, 2026Updated 2 months ago
- Codes for our paper "Full-Atom Peptide Design with Geometric Latent Diffusion" (NeurIPS 2024)☆124Apr 16, 2025Updated last year
- Paper preview on group meeting☆11Jun 1, 2026Updated 2 weeks ago
- The Python software re-glycosylates protein structures using MD simulation results from the glycoshape database. It takes alphafold prote…☆14Feb 16, 2024Updated 2 years ago
- Implementations of the renormalization group-based diffusion model (RGDM).☆15Mar 10, 2025Updated last year
- Evolutionary Algorithm with Diffusion Models for Protein Design☆31Jan 7, 2026Updated 5 months ago
- ☆29Apr 30, 2026Updated last month
- Reactive MD pipeline for GROMACS using Kinetic Monte Carlo / Molecular Dynamics (KIMMDY)☆22Apr 27, 2026Updated last month
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Score-based 3D molecule generation with neural fields - NeurIPS 2024☆28Dec 3, 2024Updated last year
- Building more accurate protein structures from backbone torsion angles☆15Mar 21, 2025Updated last year
- Inpainting protein sequence and structure☆12Nov 10, 2023Updated 2 years ago
- Boltzmann-ranked alternative protein conformations from reduced-MSA AlphaFold2☆62Apr 6, 2026Updated 2 months ago
- NuFold: End-to-End Approach for RNA Tertiary Structure Prediction with Flexible Nucleobase Center Representation☆52Oct 31, 2025Updated 7 months ago
- Code for holographic machine learning of proteins☆25Oct 29, 2024Updated last year
- Quaternion Product Units for Deep Learning on 3D Rotation Groups☆19May 19, 2020Updated 6 years ago
- Open source code for AlphaFold.☆22Jan 28, 2022Updated 4 years ago
- Official Implemetation of ConfDiff (ICML'24) - Protein Conformation Generation via Force-Guided SE(3) Diffusion Models☆85Sep 12, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆32Jun 2, 2026Updated 2 weeks ago
- This is the code related to the article 'Intrinsic persistent homology via density-based metric learning'☆10May 8, 2023Updated 3 years ago
- Official code release for Ambient Protein Diffusion☆35Aug 30, 2025Updated 9 months ago
- Python implementation of the supervised graph prediction method proposed in http://arxiv.org/abs/2202.03813 using PyTorch library and POT…☆15Feb 25, 2022Updated 4 years ago
- ☆30Aug 8, 2025Updated 10 months ago
- ☆26May 16, 2026Updated last month
- ☆12Nov 16, 2023Updated 2 years ago