☆12May 16, 2020Updated 6 years ago
Alternatives and similar repositories for trivalent_cocktail
Users that are interested in trivalent_cocktail are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Rosetta FunFolDes – a general framework for the computational design of functional proteins.☆20Apr 12, 2019Updated 7 years ago
- Parametric Building of de novo Functional Topologies☆46Mar 11, 2022Updated 4 years ago
- Protein Origami via Genetic Fusions☆19Sep 19, 2022Updated 4 years ago
- protein docking stuff☆58Apr 2, 2026Updated 7 months ago
- ☆16Jun 22, 2020Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆18Mar 13, 2024Updated 2 years ago
- Python Toolbox For Rosetta Silent Files Processing☆17May 23, 2019Updated 7 years ago
- ☆15Nov 18, 2025Updated 11 months ago
- Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…☆16Oct 27, 2021Updated 5 years ago
- Using Rotamer Interaction Fields from RIFGen/Dock in python☆17May 2, 2021Updated 5 years ago
- AF2chi implementation code for localColabFold☆10Oct 8, 2026Updated 3 weeks ago
- ☆16Jun 11, 2021Updated 5 years ago
- Neural network model for prediction of amino-acid sequence from a protein backbone structure☆25Mar 5, 2025Updated last year
- Code and software used to design de novo protein nanomachines. Supplementary material for "Computational design of nanoscale rotational m…☆10Mar 19, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Scripts and data deposition for de novo heterodimers manuscript☆11Dec 15, 2018Updated 7 years ago
- ☆47Sep 16, 2024Updated 2 years ago
- ☆23Jul 4, 2021Updated 5 years ago
- ☆11Apr 21, 2023Updated 3 years ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆51Nov 4, 2025Updated last year
- TrDesign w/ Partial Hallucination support☆10Apr 29, 2022Updated 4 years ago
- ☆20Nov 24, 2025Updated 11 months ago
- What exactly are the non-canonical amino acids in the Rosetta database folder?☆13Feb 16, 2020Updated 6 years ago
- ☆11Aug 5, 2020Updated 6 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- mPARCE: Protocol for iterative optimization of modified peptides bound to protein targets☆11Oct 19, 2022Updated 4 years ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Jul 5, 2025Updated last year
- ☆15May 29, 2024Updated 2 years ago
- Code used in the manuscript for De Novo Design of Bioactive Protein Switches☆17May 16, 2019Updated 7 years ago
- ☆38Dec 21, 2023Updated 2 years ago
- In-house inpainting pipeline (Rfdiffusion>ProteinMPNN>AF2)☆17Oct 1, 2024Updated 2 years ago
- ☆104Jul 24, 2026Updated 3 months ago
- Binding Affinity Prediction using Deep learning models☆12Jun 9, 2021Updated 5 years ago
- ProteinReDiff: Complex-based ligand-binding proteins redesign by equivariant diffusion-based generative models☆40Nov 25, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ProteinFeatureAnalyzer extracts, analyzes and visualizes features from protein structures.☆14Mar 14, 2020Updated 6 years ago
- A collection of useful tutorials for Protein Science☆18Jun 29, 2015Updated 11 years ago
- ProteinDesign with RFdiffusion and ProteinMPNN/LigandMPNN☆27Mar 6, 2025Updated last year
- EvoEF + evolutionary profile for ddG_bind prediction☆15Oct 17, 2025Updated last year
- Pytorch/Python3 implementation of DeepAccNet, protein model accuracy evaluator.☆90Jun 18, 2021Updated 5 years ago
- protein structure generation with sparse all-atom denoising models☆66Sep 30, 2026Updated last month
- Scripts and data to run AbDesign as described in Tools for protein science 2021☆13Nov 4, 2020Updated 6 years ago