Alternatives and similar repositories for trivalent_cocktail

Users that are interested in trivalent_cocktail are comparing it to the libraries listed below

• PKUliujl / GeoSeqBuilder
  ☆28Updated 9 months ago
• bigict / ProDESIGN-LE
  An accurate and efficient protein sequence design approach
  ☆25Updated 7 months ago
• matteoferla / pyrosetta-help
  Some scripts that I keep using over and over.
  ☆20Updated 4 months ago
• luo-group / MODIFY
  ML-optimized library design with improved fitness and diversity for protein engineering
  ☆36Updated last year
• lauramarie99 / ProtDesign2
  ProteinDesign with RFdiffusion and ProteinMPNN/LigandMPNN
  ☆21Updated 8 months ago
• meilerlab / probabilities_design
  ☆15Updated 7 months ago
• Andre-lab / evodock
  A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking
  ☆29Updated 4 months ago
• LongxingCao / pymol_scripts
  bakerlab pymol scripts
  ☆25Updated 5 years ago
• beckham-lab / EpHod
  Machine learning prediction of enzyme optimum pH
  ☆47Updated 6 months ago
• lcbc-epfl / metal-site-prediction
  ☆41Updated last year
• bwicky / SAPP_DMX
  ☆25Updated 3 months ago
• ProteinDesignLab / protpardelle-1c
  Updated Protpardelle models with more robust motif scaffolding and multichain support
  ☆45Updated last week
• dtischer / trdesign-motif
  Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…
  ☆16Updated 4 years ago
• amyguo1997 / dynamic_protein_design
  Code for deep learning guided design of dynamic proteins
  ☆31Updated last year
• johnnytam100 / AlphaCutter
  This repository contains the AlphaCutter.py for the removal of non-globular regions from predicted protein structures.
  ☆15Updated 2 years ago
• jafetgado / EpHod
  Machine learning prediction of enzyme optimum pH
  ☆20Updated 6 months ago
• strauchlab / iNNterfaceDesign
  ☆20Updated 3 years ago
• tommyhuangthu / EvoEF2
  Physical energy function for protein sequence design
  ☆33Updated 2 years ago
• psipred / Merizo
  Fast and accurate protein domain segmentation using Invariant Point Attention
  ☆42Updated 5 months ago
• tianlt / deepdirect
  ☆17Updated last year
• KULL-Centre / _2024_cagiada_stability
  ☆71Updated 7 months ago
• Furman-Lab / PatchMAN
  ☆27Updated 3 weeks ago
• danny305 / StabilityOracle
  ☆29Updated last month
• cl666666 / GVP-MSA
  ☆13Updated 2 years ago
• mabr3112 / riff_diff_protflow
  ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.
  ☆34Updated last month
• bene837 / af2seq
  ☆44Updated last year
• RosettaCommons / AF2_peptide_hallucination
  Code for designing binders to flexible peptides with AlphaFold2 Hallucination
  ☆28Updated last year
• Wublab / pythia_ppi
  PPI version of Pythia
  ☆22Updated last month
• LPDI-EPFL / FunFolDesData
  Rosetta FunFolDes – a general framework for the computational design of functional proteins.
  ☆21Updated 6 years ago
• oxpig / Humatch
  Fast, gene-specific joint humanisation of antibody heavy and light chains.
  ☆18Updated 10 months ago