danny305 / StabilityOracleLinks
☆30Updated 4 months ago
Alternatives and similar repositories for StabilityOracle
Users that are interested in StabilityOracle are comparing it to the libraries listed below
Sorting:
- Extension of ThermoMPNN for double mutant predictions☆53Updated 3 months ago
- ML-optimized library design with improved fitness and diversity for protein engineering☆36Updated 3 months ago
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆70Updated 7 months ago
- ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.☆80Updated 2 months ago
- This is the official code repository for the paper NeurIPS 2024 spotlight paper "Kermut: Composite kernel regression for protein variant …☆42Updated 6 months ago
- RAG-ESM is a retrieval-augmented framework that allows to condition pretrained ESM2 protein language models on homologous sequences☆27Updated 5 months ago
- Code for humanization of antibody and nanobody☆72Updated 5 months ago
- ☆47Updated last year
- Updated Protpardelle models with more robust motif scaffolding and multichain support☆64Updated last month
- ☆61Updated last year
- ☆45Updated 10 months ago
- ☆94Updated 3 months ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆61Updated 8 months ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆47Updated 3 months ago
- Official repository of GENzyme☆60Updated last year
- ☆40Updated last year
- GRACE: Generative Renaissance in Artificial Computational Enzyme Design☆19Updated last year
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆32Updated last year
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆93Updated last month
- HalluDesign, a hallucination-driven all-atom framework for the iterative co-optimization and co-design of protein sequences and structure…☆62Updated this week
- ☆73Updated 10 months ago
- ☆25Updated 8 months ago
- Profluent-E1 family of Protein Encoder Models☆102Updated 2 months ago
- ☆44Updated 6 months ago
- workflow used to prepare PPB-Affinity database☆28Updated last year
- Physics-Guided All-Atom Diffusion Model for Accurate Protein-Ligand Complex Prediction☆87Updated 4 months ago
- BindCraft modified to make PyRosetta use and installation optional: no license needed☆119Updated 2 months ago
- Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)☆47Updated last year
- Active Learning-Assisted Directed Evolution for Protein Engineering☆78Updated 3 months ago
- ☆26Updated last year