Alternatives and similar repositories for StabilityOracle

Users that are interested in StabilityOracle are comparing it to the libraries listed below

• meilerlab / HyperMPNN
  HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles
  ☆62Updated last month
• bene837 / af2seq
  ☆44Updated 10 months ago
• liuyf020419 / SCUBA-D
  ☆60Updated last year
• mabr3112 / riff_diff_protflow
  ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.
  ☆32Updated last week
• Kuhlman-Lab / ThermoMPNN-D
  Extension of ThermoMPNN for double mutant predictions
  ☆41Updated last week
• luo-group / MODIFY
  ML-optimized library design with improved fitness and diversity for protein engineering
  ☆35Updated last year
• TencentAI4S / HuDiff
  Code for humanization of antibody and nanobody
  ☆47Updated 8 months ago
• skalyaanamoorthy / PSLMs
  ☆19Updated 9 months ago
• AspirinCode / AlphaPPImd
  Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks
  ☆31Updated last year
• bunzela / AIzymes
  ☆48Updated 2 weeks ago
• PKUliujl / GeoSeqBuilder
  ☆28Updated 6 months ago
• Wublab / Pythia
  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations
  ☆63Updated 3 weeks ago
• LBM-EPFL / CARBonAra
  Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…
  ☆44Updated 8 months ago
• Kuhlman-Lab / evopro
  ☆85Updated last week
• WillHua127 / GENzyme
  Official repository of GENzyme
  ☆53Updated 8 months ago
• Ryan-Hu-Hu-Hu / GRACE
  GRACE: Generative Renaissance in Artificial Computational Enzyme Design
  ☆18Updated 6 months ago
• DeepGraphLearning / S3F
  Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)
  ☆42Updated 8 months ago
• RSCJacksonLab / local-ancestral-sequence-embeddings
  This repository contains the codebase for the paper "Leveraging ancestral sequence reconstruction for protein representation learning".
  ☆12Updated 3 months ago
• drhicks / Kejia_peptide_binders
  code for IDR binding paper 2025
  ☆39Updated 5 months ago
• KULL-Centre / _2023_Blaabjerg_SSEmb
  ☆38Updated 10 months ago
• data2code / afpdb
  Efficient manipulation of protein structures in Python
  ☆55Updated 9 months ago
• regeneron-mpds / propermab
  ☆30Updated 4 months ago
• A-Alpha-Bio / alphabind
  AlphaBind code + model accompanying pre-print
  ☆67Updated last week
• ELELAB / RosettaDDGPrediction
  ☆72Updated 5 months ago
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆63Updated 8 months ago
• Gonglab-THU / SPIRED-Fitness
  ☆41Updated 2 months ago
• pengzhangzhi / ab_opt
  Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.
  ☆60Updated last year
• KULL-Centre / _2024_cagiada_stability
  ☆70Updated 4 months ago
• JoreyYan / Originflow
  ☆16Updated 2 months ago
• ohuelab / ColabFold-cycpep-dock
  Making Protein folding accessible to all!
  ☆22Updated last year