huhlim / cg2allLinks
Convert coarse-grained protein structure to all-atom model
☆48Updated 7 months ago
Alternatives and similar repositories for cg2all
Users that are interested in cg2all are comparing it to the libraries listed below
Sorting:
- ☆70Updated last year
- Boltzmann-ranked alternative protein conformations from reduced-MSA AlphaFold2☆60Updated last month
- ☆42Updated last year
- Benchmarking code accompanying the release of `bioemu`☆53Updated last month
- A variational autoencoder that directly generates the 3D coordinates of immunoglobulin protein backbones.☆33Updated 3 years ago
- ☆19Updated 9 months ago
- Generate intrinsically disordered peptide conformations via machine learning☆24Updated last year
- ☆32Updated 2 years ago
- ☆65Updated 2 months ago
- ☆54Updated last month
- ☆80Updated this week
- ☆19Updated this week
- ☆34Updated last year
- ☆58Updated 9 months ago
- Modelling protein conformational landscape with Alphafold☆54Updated 4 months ago
- ☆37Updated 2 years ago
- PackDock: a Diffusion Based Side Chain Packing Model for Flexible Protein-Ligand Docking☆49Updated 3 months ago
- A benchmark for 3D biomolecular structure prediction models☆67Updated 8 months ago
- pyCHARMM tutorial, documentation and examples. This repository contains materials originally from the pyCHARMM Workshop run at the Univer…☆72Updated this week
- mdml: Deep Learning for Molecular Simulations☆50Updated 8 months ago
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆42Updated last year
- Workflow to clean up and fix structural problems in protein-ligand binding datasets☆66Updated 2 months ago
- FlexPose, a framework for AI-based flexible modeling of protein-ligand binding pose.☆54Updated 2 years ago
- ☆48Updated this week
- Simple protein-ligand complex simulation with OpenMM☆91Updated 2 years ago
- Force Fields☆66Updated 11 months ago
- All-Atom (Including Hydrogen!) Ligand-Conditioned Protein Sequence Design & Sidechain Packing Model☆27Updated this week
- DLPacker☆32Updated last year
- Cryptic pocket prediction using AlphaFold 2☆24Updated 3 years ago
- A convinent tool to visualize AlphaFold 3 prediction results with PyMOL and matplotlib☆19Updated last year