human-pangenomics / HG002_Data_Freeze_v1.0View external linksLinks
Human Pangenome Reference Consortium - HG002 Data Freeze (v1.0)
☆80Jun 10, 2022Updated 3 years ago
Alternatives and similar repositories for HG002_Data_Freeze_v1.0
Users that are interested in HG002_Data_Freeze_v1.0 are comparing it to the libraries listed below
Sorting:
- Data from the Human PanGenomics Project☆61Jul 15, 2021Updated 4 years ago
- ☆61Jun 14, 2021Updated 4 years ago
- Assemblies from HPP Year 1 production☆80May 9, 2023Updated 2 years ago
- Stratification BED files from the Global Alliance for Genomics and Health (GA4GH) Benchmarking Team and the Genome in a Bottle Consortium…☆83Nov 16, 2022Updated 3 years ago
- ☆44Feb 2, 2026Updated 2 weeks ago
- Detect key Units in mosaic Tandem Repeats from representative reads from the same locus☆11Aug 2, 2023Updated 2 years ago
- Characterization of Structural Variation in Chinese samples☆18Dec 22, 2021Updated 4 years ago
- ☆10Mar 11, 2025Updated 11 months ago
- This repository contains data indexes from NIST's Genome in a Bottle project.☆264Nov 30, 2023Updated 2 years ago
- Reducing reference bias using multiple population reference genomes☆34May 27, 2024Updated last year
- fork of dorado that supports S/BLOW5☆12Jan 8, 2026Updated last month
- A toolkit for exploring regions of variation in pangenomes☆14Updated this week
- A complete diploid human genome☆142Sep 26, 2025Updated 4 months ago
- Haplotype VCF comparison tools☆455Dec 7, 2023Updated 2 years ago
- WDL’s and Dockerfiles for assembly QC process☆72Jul 26, 2025Updated 6 months ago
- Toolkit for VNTR genotyping and repeat-pan genome graph construction☆31Aug 18, 2025Updated 5 months ago
- A method for measuring chromosome-specific telomere length from long reads☆22May 20, 2024Updated last year
- End-guided RNA assembler☆15Dec 2, 2025Updated 2 months ago
- BAMixChecker: A fast and efficient tool for sample matching checkup☆15Jun 12, 2022Updated 3 years ago
- Tools for the analysis of structural variation in genomes☆81Mar 25, 2024Updated last year
- Benchmarking variant calling in polyploids☆15Nov 26, 2021Updated 4 years ago
- ☆15Jun 29, 2021Updated 4 years ago
- Scripts to reproduce TrioBinning manuscript☆17Mar 31, 2020Updated 5 years ago
- Toolkit for calling and analyzing de novo STR mutations☆17Dec 17, 2023Updated 2 years ago
- Analysis and figure generation code for the ABRF NGS Phase II Study on DNA-seq reproducibility☆18Aug 5, 2021Updated 4 years ago
- ☆15Aug 1, 2021Updated 4 years ago
- ☆38Jan 14, 2026Updated last month
- ☆16Apr 9, 2021Updated 4 years ago
- Human pan-genome analysis pipeline☆31Apr 30, 2020Updated 5 years ago
- Structural variant caller☆55Dec 8, 2021Updated 4 years ago
- Clair3 - Symphonizing pileup and full-alignment for high-performance long-read variant calling☆331Updated this week
- A framework for extracting telomeric reads from single-molecule sequencing experiments, describing their sequence variation and motifs, a…☆16Jan 25, 2024Updated 2 years ago
- slow5lib is a software library for reading & writing SLOW5 files.☆47Jan 28, 2026Updated 2 weeks ago
- Cell Heterogeneity Accounted cLonal Methylation (CHALM)☆10Jul 6, 2021Updated 4 years ago
- PEPPER-Margin-DeepVariant☆257Jan 12, 2024Updated 2 years ago
- VariantStore: A Large-Scale Genomic Variant Search Index☆39Jul 9, 2021Updated 4 years ago
- ☆20Nov 30, 2023Updated 2 years ago
- Toolkit for genome-wide analysis of tandem repeats☆59Nov 7, 2025Updated 3 months ago
- Structural variant toolkit for VCFs☆397Jan 23, 2026Updated 3 weeks ago