☆44Jan 14, 2026Updated 8 months ago
Alternatives and similar repositories for Platinum-Pedigree-Datasets
Users that are interested in Platinum-Pedigree-Datasets are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- VNTR annotation using motif selection☆44Sep 21, 2026Updated 2 weeks ago
- Structural variant benchmark☆25Mar 4, 2025Updated last year
- Repository for code to produce phased 1000 Genomes Project haplotypes called against the CHM13v2 T2T reference genome.☆21Updated this week
- Phased assembly variant caller☆147Dec 4, 2024Updated last year
- Tumor-normal variant calling workflow using HiFi reads☆31Mar 4, 2026Updated 7 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Improved structural variant discovery in accurate long reads using sample-specific strings (SFS)☆49Apr 20, 2026Updated 5 months ago
- Python package for comparing genome assemblies and read data to the diploid Q100 benchmark☆21Updated this week
- A complete diploid human genome☆160Aug 10, 2026Updated 2 months ago
- Evaluating genome assemblies☆127Mar 3, 2026Updated 7 months ago
- bioinformatics toolkit in rust☆109Aug 16, 2026Updated last month
- vcfdist: Accurately benchmarking phased variant calls☆90Aug 28, 2026Updated last month
- Blazingly fast, streaming duplicate detection for NGS data☆22Updated this week
- Parakit is a tool to analyze the RCCX module, which contain the CYP21A2 gene, using long sequencing reads.☆18Jun 29, 2026Updated 3 months ago
- This repository contains the reference genome assembly Ash1, built from data collected from an Ashkenazi individual.☆12Feb 2, 2022Updated 4 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- A short tandem repeat (STR) genotyping and analysis toolkit for long reads☆22Sep 15, 2026Updated 3 weeks ago
- Genome-in-a-Bottle stratifications for major references☆16Apr 28, 2025Updated last year
- ☆133Updated this week
- Copy number caller for long read data including SNV utilization☆72Mar 31, 2025Updated last year
- Telomere-to-Telomere diploid Indian Genome☆15Mar 5, 2026Updated 7 months ago
- Characterization of Structural Variation in Chinese samples☆17Dec 22, 2021Updated 4 years ago
- Structural variant toolkit for VCFs☆424Oct 3, 2026Updated last week
- LongcallD: joint calling and phasing of small, structural and mosaic variants from long reads☆111Jun 25, 2026Updated 3 months ago
- Hybrid somatic SV caller using long reads and short-read refinement for tumor–normal sequencing.☆16May 14, 2026Updated 4 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A bioinformatics tool for viewing and calculating base modification frequencies from BAM files☆46Updated this week
- ☆68Apr 9, 2024Updated 2 years ago
- Aligns short reads using dynamic seed size with strobemers☆209Updated this week
- Jasmine: SV Merging Across Samples☆261Dec 20, 2024Updated last year
- Functions to compare a SV call sets against a truth set.☆32Jun 18, 2025Updated last year
- Lightweight mosaic/somatic SV caller for long reads (WIP)☆37Oct 27, 2025Updated 11 months ago
- Rust library for processing sequencing reads.☆25Sep 2, 2024Updated 2 years ago
- ☆85Mar 3, 2025Updated last year
- Toolkit for calling structural variants using short or long reads☆119Aug 21, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- SVHunter is a long-read-based structural variation detection through transformer model. SVHunter can detect and genotype DEL/INS/DUP/INV/…☆16Mar 31, 2025Updated last year
- Archived version 1.0.2☆16Nov 25, 2019Updated 6 years ago
- Error correction of long reads☆16Jan 30, 2026Updated 8 months ago
- Small variant, structural variant, and short tandem repeat phasing tool for PacBio HiFi reads☆88May 27, 2026Updated 4 months ago
- BAM/SAM/CRAM/FASTA reader, pileup engine, BCF/BAM writing☆29Updated this week
- Misassembly Identifier☆28Sep 5, 2026Updated last month
- MethPhaser: methylation-based haplotype phasing of human genomes☆56Mar 5, 2025Updated last year