Platinum-Pedigree-Consortium / Platinum-Pedigree-DatasetsLinks
☆34Updated 7 months ago
Alternatives and similar repositories for Platinum-Pedigree-Datasets
Users that are interested in Platinum-Pedigree-Datasets are comparing it to the libraries listed below
Sorting:
- Joint structural variant and copy number variant caller for HiFi sequencing data☆61Updated this week
- Structural variant benchmark☆18Updated 6 months ago
- Improved structural variant discovery in accurate long reads using sample-specific strings (SFS)☆45Updated 3 weeks ago
- VNTR annotation using motif selection☆37Updated 2 weeks ago
- MethPhaser: methylation-based haplotype phasing of human genomes☆49Updated 6 months ago
- MarginPolish: Graph based assembly polishing☆46Updated 4 years ago
- Alignment-free genotyper for SNPs and short indels, implemented in Python.☆50Updated 6 months ago
- ☆48Updated last year
- VACmap: a long-read aligner specifically designed for complex structural variation discovery☆36Updated 2 months ago
- somatic SV calling on matched tumor-normal co-assembly graphs☆22Updated last year
- SV analysis of the long-read sequencing data of the 1019 samples of the 1KG-ONT panel☆33Updated 4 months ago
- Tumour-only somatic mutation calling using long reads☆27Updated 10 months ago
- Tumor-normal variant calling workflow using HiFi reads☆20Updated 2 weeks ago
- Segmental Duplication Assembler (SDA).☆44Updated 2 years ago
- ☆36Updated 2 months ago
- Phased structural variant discovery in pangenomes☆36Updated last year
- Method to optimally select samples for validation and resequencing☆28Updated 4 years ago
- Lightweight mosaic/somatic SV caller for long reads (WIP)☆29Updated 9 months ago
- ☆21Updated 6 months ago
- Code for phasing SVs with SNPs☆52Updated 5 years ago
- Kmer Analysis of Pileups for Genotyping☆32Updated 3 weeks ago
- Copy number caller for long read data including SNV utilization☆67Updated 5 months ago
- Identify long STRs, VNTRs, satellite DNA and other low-complexity regions in a genome☆67Updated this week
- Variant annotation and merging pipeline☆39Updated 2 months ago
- A battery of methylation tools for PacBio HiFi reads☆41Updated 3 weeks ago
- DEPRECATED - Workflow for the comprehensive detection and prioritization of variants in human genomes with PacBio HiFi reads☆39Updated 2 years ago
- Working space for the GIAB TR benchmarking project☆21Updated 11 months ago
- ☆66Updated last year
- Easy genomic regions for short-read variant calling☆43Updated 2 weeks ago
- ☆37Updated 2 years ago