BGI-shenzhen / VCF2DisLinks
VCF2Dis: A new simple and efficient software to calculate p-distance matrix and construct population phylogeny based Variant Call Format
☆97Updated 3 months ago
Alternatives and similar repositories for VCF2Dis
Users that are interested in VCF2Dis are comparing it to the libraries listed below
Sorting:
- Multi-level visualization of genomic statistical variables on rectangular chromosomes☆95Updated last week
- Code to compute the XP-CLR statistic to infer natural selection☆98Updated 3 years ago
- NLR-Annotator upload☆71Updated 2 years ago
- Genomic related tools☆71Updated 3 years ago
- ☆82Updated last year
- Few scripts facilitating the extraction of info from Repeat Masker .out files☆81Updated 4 years ago
- A pipeline to generate a phylogenetic tree from huge SNP data☆90Updated last year
- A new simple and efficient software to PCA and Cluster For popolation VCF File☆78Updated 2 months ago
- A pipeline used to identify different modes of duplicated gene pairs☆106Updated last month
- source code for EVM☆116Updated 9 months ago
- Detailed bioinformatics scripts and methods used in the NAM genome paper.☆83Updated 7 months ago
- Python package and CLI for whole-genome duplication related analyses. **This package is deprecated in favor of** https://github.com/heche…☆85Updated last year
- DNA序列比对结果 可视化展示工具☆54Updated 2 years ago
- Haplotype based scans for selection☆131Updated last month
- ☆71Updated 5 years ago
- This is an archive version of old RepBase library (v20170127) for RepeatMasker.☆37Updated 4 years ago
- A library for running k-mers based GWAS☆114Updated 10 months ago
- tomato graph pangenome☆84Updated 2 years ago
- GCE (genomic charactor estimator) is a bayes model based method to estimate the genome size, genomic repeat content and the heterozygsis…☆53Updated 5 years ago
- A tool to extract and visualize the results of CAFE (Computational Analysis of gene Family Evolution)☆63Updated 5 years ago
- Mapping pipeline for data generated using Arima-HiC☆80Updated last year
- Reference-free profiling of polyploid genomes☆121Updated 2 months ago
- Collection of tools for the analysis of CpG data☆90Updated last month
- TEsorter: an accurate and fast method to classify LTR-retrotransposons in plant genomes☆99Updated 6 months ago
- MitoFinder: efficient automated large-scale extraction of mitogenomic data from high throughput sequencing data☆109Updated last year
- An ultra-fast and efficient genomic tool for coverage calculation☆157Updated 5 months ago
- MutMap pipeline to identify causative mutations responsible for a phenotype☆54Updated 6 months ago
- Useful bioinformatic scripts☆58Updated 9 months ago
- A Toolkit for analyzing next-generation DNA Re-Sequencing data☆84Updated 3 years ago
- ☆74Updated 5 years ago