regevs / gamma_smc
☆18Updated last year
Alternatives and similar repositories for gamma_smc:
Users that are interested in gamma_smc are comparing it to the libraries listed below
- Distinguishing among modes of convergent adaptation using population genomic data: statistical inference method, extensions, and examples☆13Updated 5 years ago
- Likelihood-based Selective Sweep Detection☆37Updated last year
- Framework for analyzing low depth NGS data in heterogeneous populations using PCA.☆48Updated 3 weeks ago
- ☆22Updated 10 months ago
- Workflow for processing Illumina sequencing runs for ancient human DNA☆20Updated 4 years ago
- Assessing confidence in introgression among four populations☆27Updated 3 years ago
- ABLE - Approximate Blockwise Likelihood Estimation☆17Updated 6 years ago
- Genome-wide scan for balancing selection using beta statistic☆28Updated last year
- Leroy & Rougemont - “learning-by-doing” introduction to population genomics - scripts☆19Updated 5 years ago
- Sampling and inference of genealogies with recombination☆29Updated 4 months ago
- a tool to identify species and inter-species hybrids and chromosome copy number variants from short-read data☆17Updated 5 years ago
- predicting DFE and alpha from polymorphism data☆28Updated 6 years ago
- Scripts for population genetics analysis☆19Updated 2 years ago
- Population genetics analyses from NGS data☆25Updated 3 years ago
- The powerful `awk` script to calculate pi, Dxy and Fst in polyploid VCF files with mixed-ploidy groups support☆24Updated last week
- ☆19Updated 4 months ago
- ☆29Updated last week
- General purpose population genetics software☆12Updated 5 years ago
- Graph-aware Retrieval of Selective Sweeps☆21Updated 5 months ago
- Sex assignment through coverage☆17Updated 11 months ago
- Scripts for reformatting data. Mainly from tab separated to an esoteric program specific format☆13Updated last month
- Software for estimating genome-wide genealogies for thousands of samples☆29Updated 4 months ago
- A genome-wide IM blockwise likelihood estimation toolkit☆15Updated 7 months ago
- Whole-genome bioinformatic pipeline for pooled or individual-based NGS data using bash and R☆19Updated 2 years ago
- Deleterious mutation prediction pipeline☆13Updated 2 months ago
- Toolkit for evolutionary analyses of linkage groups☆26Updated 7 months ago
- Tools for inference of the DFE with dadi☆14Updated 3 years ago
- D Frequency Spectrum: Signatures of introgression across the allele frequency spectrum☆16Updated 4 years ago
- A box of genomics tools☆21Updated 4 years ago