☆21Apr 15, 2024Updated last year
Alternatives and similar repositories for hprc-tutorials
Users that are interested in hprc-tutorials are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Genome Assembly 102☆17Apr 23, 2025Updated 11 months ago
- Prefix-renaming FASTA records really fast.☆17Jun 26, 2024Updated last year
- pangenome analyses for complete genomes of great apes (and gibbon)☆20Oct 12, 2024Updated last year
- lace up GFA files using panSN path name sub-ranges to coordinate the lacing☆14Jul 30, 2025Updated 8 months ago
- A toolkit for exploring regions of variation in pangenomes☆14Feb 14, 2026Updated last month
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- Pan gGnome Viewer☆10Jul 10, 2025Updated 9 months ago
- MEMO: MEM-based pangenome indexing for k-mer queries☆20Jun 11, 2024Updated last year
- GBWT-based handle graph☆32Mar 17, 2026Updated 3 weeks ago
- Identification of transposable element families from pangenome polymorphisms☆56Jun 3, 2025Updated 10 months ago
- A graph-based pipeline used to call/genotype snvs/indels/SVs from NGS data☆17Aug 30, 2025Updated 7 months ago
- General purpose utility related to GAF files☆29Apr 2, 2026Updated last week
- Panacus is a tool for computing statistics for GFA-formatted pangenome graphs☆125Mar 20, 2026Updated 3 weeks ago
- Wavefront alignment algorithm (WFA) in Golang☆31Jul 26, 2025Updated 8 months ago
- MONI: A Pangenomic Index for Finding MEMs☆37Mar 25, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆126Oct 18, 2023Updated 2 years ago
- Genotyping lots of samples with big pangenomes☆11Oct 30, 2025Updated 5 months ago
- Pangenome-based genome inference☆165Dec 1, 2025Updated 4 months ago
- ☆19May 10, 2023Updated 2 years ago
- implicit pangenome graph☆98Updated this week
- ☆47Mar 19, 2026Updated 3 weeks ago
- a nextflow pipeline for creating a pangenome with minigraph-cactus☆16Sep 13, 2024Updated last year
- A program for assessing the T2T genome continuity☆94Feb 28, 2026Updated last month
- ☆11Sep 4, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- ☆102Apr 22, 2024Updated last year
- Library for the Handle Graph abstraction☆24Jan 15, 2026Updated 2 months ago
- PAF (pairwise alignment format) validator based on extended CIGAR strings☆15Aug 10, 2025Updated 8 months ago
- Differential quantification of alternative splicing events on spliced pangenome graphs☆15Jan 30, 2026Updated 2 months ago
- WDL’s and Dockerfiles for assembly QC process☆72Jul 26, 2025Updated 8 months ago
- A list of software for pangenomics☆180Mar 24, 2026Updated 2 weeks ago
- ☆186Feb 10, 2026Updated 2 months ago
- Robust individual and aggregate checksums for nucleotide sequences☆17Mar 3, 2026Updated last month
- ☆42Feb 15, 2026Updated last month
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Ultra-efficient and sensitive method to search for Open Reading Frames in spliced genomes guided by reference annotation to maximize prot…☆43Mar 21, 2026Updated 3 weeks ago
- genome variation graphs constructed from HLA GRCh38 ALTs☆23Dec 24, 2021Updated 4 years ago
- ☆14Apr 26, 2023Updated 2 years ago
- Immuological gene typing and annotation for genome assembly☆38Mar 13, 2025Updated last year
- syncmer graphs, and perhaps other sorts of sequence graphs☆33Apr 1, 2026Updated last week
- The PanGenome Graph Builder☆17Jul 17, 2024Updated last year
- ☆13May 27, 2025Updated 10 months ago