RMolania / TCGA_PanCancer_UnwantedVariation
☆47Updated last year
Alternatives and similar repositories for TCGA_PanCancer_UnwantedVariation:
Users that are interested in TCGA_PanCancer_UnwantedVariation are comparing it to the libraries listed below
- ConsensusTME Gene Sets and R Script☆39Updated 8 months ago
- A unified interface to spatial transcriptomics deconvolution tools☆40Updated this week
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆42Updated last year
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆26Updated 7 months ago
- ☆39Updated 3 years ago
- A tool for removing doublets from single-cell RNA-seq data☆71Updated 4 years ago
- Cluster single cells and analyze cell clade relationships with colorful visualizations.☆45Updated 3 years ago
- SIB/Scilifelab autumn school in single cell omics 2019.☆22Updated 5 years ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆31Updated 2 months ago
- Gene regulatory network containing signed transcription factor-target gene interactions☆70Updated 9 months ago
- R package for specialised analysis of single cell data☆37Updated 2 years ago
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆31Updated last year
- Aligning gene expression trajectories of single-cell reference and query systems☆58Updated 4 months ago
- Coarse-graining of large single-cell RNA-seq data into metacells☆72Updated 5 months ago
- Pipeline for characterizing metebolic heterogeneity from single-cell RNA-seq data☆23Updated 3 years ago
- Gene set enrichment analysis for single-cell RNAseq data☆28Updated 2 years ago
- Unified access to several second-generation deconvolution methods☆65Updated this week
- an integrative analysis tool for analysing large-scale single cell RNA-sequencing data☆33Updated last year
- Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data☆36Updated 2 years ago
- scWGCNA☆56Updated 2 years ago
- ☆38Updated 4 years ago
- R package for decontaminating the spot swapping effect and recovering true expression in spatial transcriptomics data☆28Updated 8 months ago
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆35Updated 3 years ago
- An R shiny based tool used for single cell RNA-seq data visualization and analysis.☆32Updated 4 years ago
- Cell type pipes for R☆51Updated last year
- ☆60Updated 4 years ago
- Pan-Cancer Single Cell Classifier☆64Updated 8 months ago
- ☆59Updated 5 years ago
- ☆57Updated 7 months ago
- R Package for Single-Cell Dataset Processing and Visualization☆61Updated 3 years ago