hzaurzli / MicroWorldOmicsLinks
☆15Updated last week
Alternatives and similar repositories for MicroWorldOmics
Users that are interested in MicroWorldOmics are comparing it to the libraries listed below
Sorting:
- A shiny package for microbiome functional enrichment analysis☆37Updated 3 months ago
- ☆10Updated 2 months ago
- Qiime2 snakemake pipeline☆18Updated last year
- OPAL: Open-community Profiling Assessment tooL☆29Updated 6 months ago
- ShortBRED is a pipeline to take a set of protein sequences, reduce them to a set of unique identifying strings ("markers"), and then sear…☆30Updated 5 months ago
- NCBI taxonomic identifier (taxid) changelog, including taxids deletion, new adding, merge, reuse, and rank/name changes.☆30Updated 2 months ago
- A metagenomic strategy for harnessing the chemical repertoire of the human microbiome☆33Updated last month
- Trimming tool for Oxford Nanopore sequence data☆21Updated 4 years ago
- Automatically design multiplex PCR primer pairs for diverse templates☆28Updated last year
- Metagenome analysis using the Kraken software suite☆32Updated 2 years ago
- An R Package for Multiplex PCR Primer Design and Analysis☆27Updated last week
- A microbial profiling framework for metagenomic analysis☆24Updated 5 years ago
- A program for degenerate primer design for broad taxonomic-range PCR for microbial ecology studies☆30Updated 2 years ago
- MinPath (Minimal set of Pathways) is a parsimony approach for biological pathway reconstructions using protein family predictions, achiev…☆22Updated 4 years ago
- Profiler for metagenomics based on NGLess☆13Updated last year
- finding conserved regions in highly diverse genomes☆15Updated last month
- FastViromeExplorer project. Forked from https://code.vt.edu/saima5/FastViromeExplorer☆14Updated 6 years ago
- MGKit: Metagenomics Framework☆17Updated 2 years ago
- Codes and sample data supporting the Dutch Microbiome Project. The preprint is currently available at https://www.biorxiv.org/content/10.…☆34Updated 4 years ago
- ☆43Updated last year
- ☆15Updated 4 years ago
- Influenza genome analysis Nextflow workflow☆28Updated 3 months ago
- repo for cicese metatranscriptomics workshop, nov 2018☆14Updated 5 years ago
- Computational workflows for metagenomics tasks, by the Bhatt lab☆47Updated 2 years ago
- BigSeqKit: a parallel Big Data toolkit to process FASTA and FASTQ files at scale☆56Updated last year
- A containerized bioinformatics pipeline for viral metagenomic data analysis☆32Updated 11 months ago
- MetaMLST is a computational tool for in-silico Multi-Locus Sequence Typing from metagenomic data.☆16Updated 2 years ago
- DETONATE: DE novo TranscriptOme rNa-seq Assembly with or without the Truth Evaluation☆13Updated 9 years ago
- Quality assessment of de novo transcriptome assemblies from RNA-Seq data☆22Updated last month
- Tutorial for bacterial GWAS pipline and bugwas, created for Bodega Bay 2016 NGS workshop☆18Updated 9 years ago