☆15Oct 7, 2025Updated 7 months ago
Alternatives and similar repositories for MicroWorldOmics
Users that are interested in MicroWorldOmics are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Microbe-Metabolite INteractions-based metabolic profiles Predictor☆16Mar 17, 2023Updated 3 years ago
- USDA Nutrition codes Tree☆11Feb 13, 2020Updated 6 years ago
- Compute strain abundance in a defined microbial community☆10Jul 27, 2023Updated 2 years ago
- an R package to biotype a community☆14Oct 19, 2021Updated 4 years ago
- repo for cicese metatranscriptomics workshop, nov 2018☆14Jan 22, 2020Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆12Jun 12, 2019Updated 6 years ago
- Single-cell Analysis of Host-Microbiome Interactions☆11Jul 17, 2025Updated 10 months ago
- Software to process, statistically analyse and visualise deep mutational scanning data☆14Apr 28, 2026Updated last month
- Code and data used in Mollentze et al. (2021) "Identifying and prioritizing potential human-infecting viruses from their genome sequences…☆19Apr 15, 2026Updated last month
- Development repository for the multiMiR database's R API☆24Aug 28, 2024Updated last year
- ☆23Apr 13, 2026Updated last month
- Identification of viral RdRPs in single-cell RNA sequencing data☆13Mar 12, 2026Updated 2 months ago
- Pipeline to run qiime2 with snakemake☆18Apr 17, 2020Updated 6 years ago
- ☆12Dec 22, 2025Updated 5 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- METAgenomic LONgitudinal Differential Abundance method☆16Dec 17, 2019Updated 6 years ago
- ☆11Apr 27, 2026Updated last month
- CGView is a Java package for generating high-quality, zoomable maps of circular genomes.☆55Mar 2, 2026Updated 2 months ago
- PhyloAln: a convenient reference-based tool to align sequences and high-throughput reads for phylogeny and evolution in the omic era☆18Apr 16, 2026Updated last month
- Metagenomic search for novel CRISPR-transposons☆12Sep 30, 2021Updated 4 years ago
- Main development repository for SpreadGL☆22Sep 30, 2024Updated last year
- Crossmapped phenotype ontologies for the oncology domain☆15Mar 29, 2026Updated 2 months ago
- Amplicon sequence processing workflow using QIIME 2 and Snakemake☆45Mar 16, 2026Updated 2 months ago
- 🐻⇔🐨 Calculate distance matrix from ChewBBACA cgMLST allele call tables☆29Feb 12, 2026Updated 3 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Pair Programming made user-friendly with your web browser.☆93Oct 5, 2022Updated 3 years ago
- some short but practical PERL script in NGS data analysis☆16Oct 30, 2017Updated 8 years ago
- ☆13Sep 5, 2017Updated 8 years ago
- VAginaL community state typE Nearest CentroId clAssifier☆24Apr 18, 2023Updated 3 years ago
- openbiox 翻译计划☆16Jun 10, 2019Updated 6 years ago
- IAN: An Intelligent System for Omics Data Analysis and Discovery☆10Feb 23, 2026Updated 3 months ago
- LucaVirus: Modeling the Evolutionary and Functional Landscape of Viruses with a Unified Genome-Protein Language Model☆68Updated this week
- ☆11May 3, 2017Updated 9 years ago
- Source code of openbiox homepage (under development status).☆14May 9, 2023Updated 3 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Snakemake workflow for somatic mutation detection without matched normal samples☆13Mar 4, 2023Updated 3 years ago
- Virus reassortment inference software. Infers both recent and ancestral reassortment and uses flexible molecular clock constraints.☆23Sep 29, 2025Updated 8 months ago
- Primalscheme3. Generation of highly multiplex primerschemes☆22Dec 4, 2025Updated 5 months ago
- A mini course on biological data analysis☆10Jan 16, 2025Updated last year
- A Full Featured Multiple Sequence Alignment Editor.☆26May 21, 2018Updated 8 years ago
- Program for finding horizontal gene transfer using BLAST result☆11May 26, 2023Updated 3 years ago
- nRex: Germline and somatic single-nucleotide, short indel and structural variant calling☆12Sep 19, 2025Updated 8 months ago