AnWiercze / NanopoReaTALinks
Nanopore Real-Time Analysis Tool
☆15Updated last year
Alternatives and similar repositories for NanopoReaTA
Users that are interested in NanopoReaTA are comparing it to the libraries listed below
Sorting:
- convert a blast output to a bed file☆12Updated 10 years ago
- DETONATE: DE novo TranscriptOme rNa-seq Assembly with or without the Truth Evaluation☆13Updated 9 years ago
- The shiny app that accompanies the ngsReports R package☆14Updated 4 years ago
- De novo VIral Genome Annotator☆23Updated last year
- Influenza genome analysis Nextflow workflow☆22Updated this week
- Fast in-silico normalization algorithm for NGS data☆23Updated 3 years ago
- Trimming tool for Oxford Nanopore sequence data☆22Updated 4 years ago
- PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…☆30Updated 3 years ago
- SeqWho - A reliable and rapid FASTQ(A) file classifier☆10Updated 3 years ago
- ☆15Updated 7 years ago
- transposable element typing pipeline☆19Updated last year
- SARS-CoV-2 analysis pipeline for multiplex-PCR MPS(Massive Parrallel Sequencing) data☆20Updated 3 years ago
- SAMStat displays various properties of next-generation sequencing reads stored in SAM/BAM format.☆24Updated 2 years ago
- An RNA virus strain-level identification tool for short reads.☆21Updated last year
- SARS-CoV-2: detecting recombinations in viruses using large data sets with high sequence similarity☆13Updated 2 years ago
- a versatile toolkit for processing and analyzing diverse types of sequence data☆21Updated 9 months ago
- ☆10Updated 4 months ago
- CNEFinder: Finding Conserved Non-coding Elements in Genomes☆24Updated 4 years ago
- Simultaneous multi-sample transcript assembler for RNA-seq data☆17Updated 9 months ago
- ☆11Updated 2 weeks ago
- Strain-level abundances estimation in metagenomic samples using variation graphs☆24Updated 2 years ago
- MapCaller – An efficient and versatile approach for short-read alignment and variant detection in high-throughput sequenced genomes☆30Updated 4 years ago
- A simple tool to fix PacBio fasta/q that was not properly split into subreads☆15Updated 4 years ago
- Quality assessment of de novo transcriptome assemblies from RNA-Seq data☆24Updated 3 months ago
- ☆16Updated 2 months ago
- easy_sbatch - Batch submitting Slurm jobs with script templates☆16Updated 3 years ago
- Whole organelle genome-wide alignment construction method, which ultilizes BLAST tool, to facilitate phylogeny analysis☆11Updated 7 years ago
- A software suite for accurate identification, annotation, translation, and feature characterization of annotate transcripts.☆19Updated 4 years ago
- Small and simple scripts useful for various bioinformatics purposes e.g. extract sequences from fasta files☆21Updated 2 years ago
- Improved Phased Assembler☆28Updated 3 years ago