Drinchai / BloodGen3Module
This R package for performing module repertoire analyses and generating fingerprint representations
☆14Updated 3 years ago
Alternatives and similar repositories for BloodGen3Module:
Users that are interested in BloodGen3Module are comparing it to the libraries listed below
- R implementation of the Reshef and Rumker CNA method (https://github.com/immunogenomics/cna)☆14Updated last year
- Compute the neighborhood consolidation matrix and identify SHRs☆13Updated last month
- Single-cell analysis with non-negative matrix factorization☆44Updated 3 months ago
- twosigma☆8Updated last year
- Clone of the Bioconductor repository for the scRNAseq package.☆24Updated last month
- Flexible, probablistic metrics for quality control of scRNA-seq data☆19Updated 2 years ago
- Brings SingleCellExperiment objects to the tidyverse☆36Updated 2 months ago
- ☆16Updated 3 months ago
- ☆29Updated last year
- An r package that works as a wrapper to homologene☆42Updated last year
- Code used to carry out parameter estimation, correlation estimation, type 1 error analysis, and power analysis for our "Pseudoreplication…☆20Updated 4 years ago
- MASC: Mixed-effects Association testing for Single Cells☆15Updated 3 years ago
- Toolkit for Single-Cell Velocity☆54Updated last month
- R package for Flexible dot plots☆29Updated 2 years ago
- Inferring gene co-expression networks from single cell gene expression data☆24Updated 2 years ago
- Gene-level general linear mixed model☆19Updated last month
- A end-to-end scRNA-seq analysis pipeline for cross-group comparison☆17Updated this week
- ☆23Updated last year
- Human brain, >200,000 nuclei☆24Updated 3 years ago
- Clone of the Bioconductor repository for the basilisk package.☆27Updated last week
- Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data☆36Updated 2 years ago
- Calculation of distance metrics for matrices☆25Updated 5 years ago
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆44Updated last year
- scDataviz: single cell dataviz and downstream analyses☆63Updated 3 years ago
- Cell type pipes for R☆51Updated last year
- An R wrapper for too-many-cells, for clustering single cells and analyzing cell clade relationships with colorful visualizations.☆25Updated 4 years ago
- CellAnn☆12Updated last year
- Antique or modern atlas-like depictions of non-linear dimensionality reduction for single cell data☆18Updated 10 months ago
- ☆12Updated 9 months ago
- satuRn is a highly performant and scalable method for performing differential transcript usage analyses.☆21Updated last year