01life / ViromeFlowXLinks
☆10Updated last month
Alternatives and similar repositories for ViromeFlowX
Users that are interested in ViromeFlowX are comparing it to the libraries listed below
Sorting:
- Collection of R scripts for SARS-CoV-2 (variant) analyses☆12Updated 2 years ago
- Pipeline for metagenomic community analysis using DNA isolated from virus-like particles☆12Updated 5 years ago
- Influenza genome analysis Nextflow workflow☆22Updated 2 months ago
- MetaSNV, a metagenomic SNV calling pipeline.☆20Updated 3 years ago
- Integrative virome pipeline☆13Updated 7 months ago
- A pipeline for whole genome assembly☆16Updated 3 years ago
- hAMRoaster is an analysis pipeline that can compare the output of tools for detecting AMR genes and provide metrics of their performance☆22Updated last year
- An `R` package for various phylogenetic and evolutionary biology data manipulations☆12Updated 7 years ago
- Automated processing of Sanger sequencing data, taxonomic profiling, and generation of microbial strain libraries☆10Updated last month
- Strain-level abundances estimation in metagenomic samples using variation graphs☆25Updated 2 years ago
- A containerized bioinformatics pipeline for viral metagenomic data analysis☆32Updated 10 months ago
- SARS-CoV-2: detecting recombinations in viruses using large data sets with high sequence similarity☆13Updated last year
- BinaRena: Interactive Visualization and Binning of Metagenomic Contigs☆32Updated 10 months ago
- ☆22Updated 2 years ago
- Processing support for Greengenes2☆12Updated last year
- GRIMER performs analysis of microbiome studies and generates a portable and interactive dashboard integrating annotation, taxonomy and me…☆23Updated 2 years ago
- MAG Circularization Method☆33Updated 3 years ago
- Dadaist2 🟨 Highway to R☆13Updated 3 months ago
- Rapid and simple taxonomic profiling of genome and metagenome contigs☆28Updated 2 years ago
- Pan-genome Analysis☆12Updated last month
- Hybrid Assembler for Plasmids☆10Updated 2 years ago
- Resolving Species Level Classification Using Emu☆13Updated last year
- Plot genome alignment figure using progressiveMauve & genoPlotR☆22Updated 2 years ago
- Trans-Kingdom Marker Gene Pipeline for Taxonomic Profiling of Human Metagenomes☆19Updated last year
- Set of utilities on sequences and BAM files☆27Updated 3 years ago
- An RNA virus strain-level identification tool for short reads.☆21Updated last year
- detect temperate phage (active prophage) in assembled bacterial genome sequences☆14Updated 3 years ago
- Extract metadata from biosamples in NCBI☆15Updated 4 years ago
- De novo VIral Genome Annotator☆21Updated 9 months ago
- ViromeQC is a computational tool to benchmark and quantify non-viral contamination in VLP-enrihed viromes. ViromeQC provides an enrichmen…☆19Updated 2 years ago