Alternatives and similar repositories for EpiDope

Users that are interested in EpiDope are comparing it to the libraries listed below

• rnajena / EpiDope
  Prediction of B-cell epitopes from amino acid sequences using deep neural networks.
  ☆18Updated 3 years ago
• hzi-bifo / epitope-prediction
  ☆19Updated last year
• wells-wood-research / BAlaS
  Source code for the BUDE Alanine Scan web application.
  ☆12Updated 8 months ago
• lasersonlab / pepsyn
  Peptide library design
  ☆23Updated 5 years ago
• GreiffLab / manuscript_ab_epitope_interaction
  ☆25Updated 2 years ago
• dmis-lab / moable
  Predicting mechanism of action of novelcompounds using compound structure andtranscriptomic signature co-embedding
  ☆14Updated 2 years ago
• wallnerlab / ProQDock
  ProQDock is a Protein-Protein docking scoring program that uses high level coordinate driven features compiled and trained by a Support V…
  ☆11Updated 4 years ago
• dmnfarrell / epitopepredict
  Python package and command line tool for epitope prediction
  ☆52Updated last year
• tommyhuangthu / SSIPe
  EvoEF + evolutionary profile for ddG_bind prediction
  ☆14Updated 3 months ago
• KULL-Centre / _2022_functional-sites-cagiada
  ☆23Updated 2 years ago
• Santollan / Frankies
  Frankies Scalable, AI-Based Antibody Design Pipeline
  ☆18Updated 4 months ago
• largelymfs / deepcontact
  DeepContact Software
  ☆26Updated 7 years ago
• GodzikLab / FATCAT-dist
  ☆18Updated 3 years ago
• BGSU-RNA / fr3d-python
  Python implementation of the FR3D software for searching and annotating RNA 3D structures
  ☆21Updated this week
• X-lab-3D / PANDORA
  MODELLER-based, anchor restrained, Peptide-MHC Modelling pipeline
  ☆27Updated this week
• Bitbol-Lab / Phylogeny-MSA-Transformer
  Supporting repository for "Protein language models trained on multiple sequence alignments learn phylogenetic relationships" (https://www…
  ☆17Updated last year
• gzBiomedical / EpiScan
  Antibody-Specific Epitope Mapping
  ☆15Updated 4 months ago
• samgoldman97 / Codon-Optimization
  A neural based approach to the task of genetic codon optimization
  ☆18Updated 5 years ago
• drgoulet / Codon-optimization
  Use machine learning to design codon-optimized DNA sequences for increased protein expression.
  ☆15Updated 3 years ago
• ViennaRNA / RNAsketch
  Python wrapper to design RNA molecules using RNAblueprint, RNARedPrint and for energy evaluations ViennaRNA, Hotknots, pKiss and Nupack.
  ☆21Updated 7 years ago
• DunbrackLab / ProtCID
  Protein common interface databases
  ☆10Updated 6 years ago
• jurgjn / af-protein-universe
  Code, intermediate results and an interactive visualisation on prediction of putative novel enzymes and small molecule binding proteins p…
  ☆27Updated 2 years ago
• CBIIT / KDS
  KDS software for Kinase Drug Selectivity
  ☆11Updated 2 years ago
• BioComputingUP / MobiDB-lite
  Long disorder consensus predictor
  ☆18Updated 5 months ago
• pcpLiu / DeepSeqPanII
  A sequence-based pan model for peptide-MHC II binding affinity prediction.
  ☆21Updated 3 years ago
• Superzchen / iFeatureOmega-CLI
  iFeatureOmega is a comprehensive platform for generating, analyzing and visualizing more than 170 representations for biological sequence…
  ☆32Updated 2 years ago
• Rostlab / ConSurf
  Evolutionary conservation estimation of residues or nucleotides
  ☆57Updated 3 years ago
• mgalardini / pdb2uniprot
  Convert PDB residues to their Uniprot equivalents
  ☆17Updated 5 years ago
• FowlerLab / Envision2017
  We present Envision, an accurate predictor of protein variant molecular effect, trained using large-scale experimental mutagenesis data. …
  ☆19Updated 8 years ago
• lehner-lab / DMS2structure
  Scripts for "Determining protein structures using deep mutagenesis", Schmiedel & Lehner, Nature Genetics, 2019
  ☆19Updated 6 years ago