Alternatives and similar repositories for EpiDope

Users that are interested in EpiDope are comparing it to the libraries listed below

• rnajena / EpiDope
  Prediction of B-cell epitopes from amino acid sequences using deep neural networks.
  ☆17Updated 2 years ago
• hzi-bifo / epitope-prediction
  ☆18Updated last year
• wells-wood-research / BAlaS
  Source code for the BUDE Alanine Scan web application.
  ☆12Updated 3 months ago
• GreiffLab / manuscript_ab_epitope_interaction
  ☆25Updated last year
• tommyhuangthu / SSIPe
  EvoEF + evolutionary profile for ddG_bind prediction
  ☆14Updated 2 years ago
• lasersonlab / pepsyn
  Peptide library design
  ☆23Updated 4 years ago
• gzBiomedical / EpiScan
  Antibody-Specific Epitope Mapping
  ☆14Updated 9 months ago
• dmnfarrell / epitopepredict
  Python package and command line tool for epitope prediction
  ☆52Updated last year
• jurgjn / af-protein-universe
  Code, intermediate results and an interactive visualisation on prediction of putative novel enzymes and small molecule binding proteins p…
  ☆26Updated 2 years ago
• X-lab-3D / PANDORA
  MODELLER-based, anchor restrained, Peptide-MHC Modelling pipeline
  ☆22Updated 2 months ago
• Santollan / Frankies
  Frankies Scalable, AI-Based Antibody Design Pipeline
  ☆16Updated 2 months ago
• biomed-AI / GPSite
  Geometry-aware protein binding site predictor
  ☆21Updated last year
• KULL-Centre / _2022_functional-sites-cagiada
  ☆22Updated 2 years ago
• BioComputingUP / MobiDB-lite
  Long disorder consensus predictor
  ☆16Updated 5 months ago
• esbgkannan / kibby
  A fast, alignment-free method for estimating sequence conservation using protein sequence embedding
  ☆17Updated 2 years ago
• mgalardini / pdb2uniprot
  Convert PDB residues to their Uniprot equivalents
  ☆17Updated 5 years ago
• Rostlab / ConSurf
  Evolutionary conservation estimation of residues or nucleotides
  ☆47Updated 3 years ago
• hgbrian / biocolabs
  a collection of colabs useful for molecular biology
  ☆31Updated last year
• matsengrp / vampire
  🧛 Deep generative models for TCR sequences 🧛
  ☆17Updated 3 years ago
• GodzikLab / FATCAT-dist
  ☆17Updated 2 years ago
• ViennaRNA / RNAsketch
  Python wrapper to design RNA molecules using RNAblueprint, RNARedPrint and for energy evaluations ViennaRNA, Hotknots, pKiss and Nupack.
  ☆21Updated 6 years ago
• Superzchen / iFeatureOmega-CLI
  iFeatureOmega is a comprehensive platform for generating, analyzing and visualizing more than 170 representations for biological sequence…
  ☆34Updated 2 years ago
• kaistsystemsbiology / DeepProZyme
  DeepECtransformer
  ☆26Updated last year
• pcpLiu / DeepSeqPanII
  A sequence-based pan model for peptide-MHC II binding affinity prediction.
  ☆21Updated 3 years ago
• drgoulet / Codon-optimization
  Use machine learning to design codon-optimized DNA sequences for increased protein expression.
  ☆15Updated 2 years ago
• TurtleTools / caretta
  A software-suite to perform multiple protein structure alignment and structure feature extraction.
  ☆30Updated 2 years ago
• CBIIT / KDS
  KDS software for Kinase Drug Selectivity
  ☆11Updated 2 years ago
• Bitbol-Lab / Phylogeny-MSA-Transformer
  Supporting repository for "Protein language models trained on multiple sequence alignments learn phylogenetic relationships" (https://www…
  ☆17Updated 7 months ago
• walterlab-HMS / SPOC
  Code repository for the SPOC tool for scoring binary AF-M predicitons.
  ☆13Updated 4 months ago
• PDB-REDO / AlphaBridge
  ☆40Updated 2 weeks ago