ElanaPearl / InterPLMLinks
Discovering Interpretable Features in Protein Language Models via Sparse Autoencoders
☆181Updated 4 months ago
Alternatives and similar repositories for InterPLM
Users that are interested in InterPLM are comparing it to the libraries listed below
Sorting:
- Protein language model customized for antibodies☆137Updated 3 months ago
- ☆175Updated last year
- Fast protein backbone generation with SE(3) flow matching.☆267Updated 11 months ago
- Proteina is a new large-scale flow-based protein backbone generator that utilizes hierarchical fold class labels for conditioning and rel…☆177Updated 3 weeks ago
- The Family of Diffusion Protein Language Models (DPLM)☆194Updated 3 weeks ago
- ProtMamba: a homology-aware but alignment-free protein state space model☆69Updated 3 weeks ago
- FAPLM: A Drop-in Efficient Pytorch Implementation of Protein Language Models☆131Updated last week
- ☆109Updated last month
- Implementation of Chroma, generative models of protein using DDPM and GNNs, in Pytorch☆160Updated 2 years ago
- Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. http:…☆123Updated 2 months ago
- Lbster: Language models for Biological Sequence Transformation and Evolutionary Representation☆119Updated this week
- Official repository for the paper "Tranception: Protein Fitness Prediction with Autoregressive Transformers and Inference-time Retrieval"☆157Updated last year
- ☆58Updated last year
- All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteins☆97Updated 3 weeks ago
- A list of manuscripts/tools using diffusion on biological enttieis☆97Updated last year
- A short course on proteins and protein design aimed at early career students☆155Updated 11 months ago
- Benchmarking framework for protein representation learning. Includes a large number of pre-training and downstream task datasets, models …☆242Updated last month
- Aligning protein generative models with experimental fitness☆99Updated last month
- Pretraining infrastructure for multi-hybrid AI model architectures☆169Updated last month
- Implementation and replication of ProGen, Language Modeling for Protein Generation, in Jax☆113Updated 3 years ago
- De Novo Protein Design by Equivariantly Diffusing Oriented Residue Clouds☆179Updated last year
- Official repository for the ProteinGym benchmarks☆324Updated last week
- ☆115Updated last year
- Nature Methods: RhoFold+, Accurate RNA 3D structure prediction using a language model-based deep learning approach☆165Updated 3 weeks ago
- Ankh: Optimized Protein Language Model☆226Updated last week
- Versatile computational pipeline for processing protein structure data for deep learning applications.☆260Updated last year
- gRNAde: Geometric Deep Learning for 3D RNA inverse design (ICLR 2025 Spotlight)☆205Updated 3 months ago
- RITA is a family of autoregressive protein models, developed by LightOn in collaboration with the OATML group at Oxford and the Debora Ma…☆97Updated 2 years ago
- Protein structure diffusion model for unconditional protein generation and motif scaffolding☆158Updated last year
- Bi-Directional Equivariant Long-Range DNA Sequence Modeling☆191Updated last week