Alternatives and similar repositories for InterPLM

Users that are interested in InterPLM are comparing it to the libraries listed below

• lucidrains / alphagenome
  Implementation of AlphaGenome, Deepmind's updated genomic attention model
  ☆62Updated 3 weeks ago
• etowahadams / interprot
  ☆116Updated 3 months ago
• rs239 / abmap
  Protein language model customized for antibodies
  ☆140Updated 5 months ago
• jasonkyuyim / multiflow
  ☆192Updated last year
• OpenBioML / protein-lm-scaling
  ☆58Updated last year
• pengzhangzhi / faplm
  FAPLM: A Drop-in Efficient Pytorch Implementation of Protein Language Models
  ☆149Updated 3 weeks ago
• Bitbol-Lab / ProtMamba-ssm
  ProtMamba: a homology-aware but alignment-free protein state space model
  ☆78Updated 2 months ago
• OATML-Markslab / Tranception
  Official repository for the paper "Tranception: Protein Fitness Prediction with Autoregressive Transformers and Inference-time Retrieval"
  ☆159Updated 2 years ago
• prescient-design / cortex
  A Modular Architecture for Deep Learning Systems
  ☆43Updated 3 months ago
• prescient-design / lobster
  Lbster: Language models for Biological Sequence Transformation and Evolutionary Representation
  ☆125Updated last week
• lucidrains / chroma-pytorch
  Implementation of Chroma, generative models of protein using DDPM and GNNs, in Pytorch
  ☆159Updated 2 years ago
• NVIDIA-Digital-Bio / proteina
  Proteina is a new large-scale flow-based protein backbone generator that utilizes hierarchical fold class labels for conditioning and rel…
  ☆199Updated last month
• DrLeucine / how_to_create_a_protein
  A short course on proteins and protein design aimed at early career students
  ☆157Updated last year
• microsoft / protein-frame-flow
  Fast protein backbone generation with SE(3) flow matching.
  ☆279Updated last year
• bytedance / dplm
  The Family of Diffusion Protein Language Models (DPLM)
  ☆243Updated last month
• amyxlu / cheap-proteins
  Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. http:…
  ☆132Updated 4 months ago
• chaitjo / geometric-rna-design
  gRNAde: Geometric Deep Learning for 3D RNA inverse design (ICLR 2025 Spotlight)
  ☆212Updated 5 months ago
• instadeepai / protein-sequence-bfn
  Supporting code for our paper "Protein Sequence Modelling with Bayesian Flow Networks"
  ☆46Updated 5 months ago
• Zymrael / savanna
  Pretraining infrastructure for multi-hybrid AI model architectures
  ☆181Updated last month
• biolists / biodiffusion
  A list of manuscripts/tools using diffusion on biological enttieis
  ☆97Updated last year
• HannesStark / dirichlet-flow-matching
  ☆118Updated last year
• michaelhla / pro-1
  reasoning model trained using GRPO towards rosetta REF2015 for protein stability
  ☆88Updated last month
• kuleshov-group / caduceus
  Bi-Directional Equivariant Long-Range DNA Sequence Modeling
  ☆203Updated 2 months ago
• agemagician / Ankh
  Ankh: Optimized Protein Language Model
  ☆230Updated 2 months ago
• aqlaboratory / genie
  De Novo Protein Design by Equivariantly Diffusing Oriented Residue Clouds
  ☆181Updated last year
• BorgwardtLab / proteinshake
  Protein structure datasets for machine learning.
  ☆111Updated 4 months ago
• a-r-j / ProteinWorkshop
  Benchmarking framework for protein representation learning. Includes a large number of pre-training and downstream task datasets, models …
  ☆250Updated 4 months ago
• aqlaboratory / genie2
  Protein structure diffusion model for unconditional protein generation and motif scaffolding
  ☆166Updated last year
• instadeepai / bioclip
  Contrasting Sequence with Structure: Pre-training Graph Representations with PLMs
  ☆24Updated last year
• google-deepmind / nuclease_design
  ML-guided enzyme engineering
  ☆65Updated last week