ElanaPearl / InterPLM
Discovering Interpretable Features in Protein Language Models via Sparse Autoencoders
☆170Updated 3 months ago
Alternatives and similar repositories for InterPLM
Users that are interested in InterPLM are comparing it to the libraries listed below
Sorting:
- ☆100Updated last week
- ☆159Updated last year
- Protein language model customized for antibodies☆131Updated last month
- ProtMamba: a homology-aware but alignment-free protein state space model☆62Updated last month
- Proteina is a new large-scale flow-based protein backbone generator that utilizes hierarchical fold class labels for conditioning and rel…☆157Updated 2 months ago
- Implementation of Chroma, generative models of protein using DDPM and GNNs, in Pytorch☆158Updated 2 years ago
- FAPLM: A Drop-in Efficient Pytorch Implementation of Protein Language Models☆116Updated 3 weeks ago
- Fast protein backbone generation with SE(3) flow matching.☆260Updated 9 months ago
- A list of manuscripts/tools using diffusion on biological enttieis☆96Updated last year
- Official Implemetation of DPLM (ICML'24) - Diffusion Language Models Are Versatile Protein Learners☆159Updated last week
- Official repository for the paper "Tranception: Protein Fitness Prediction with Autoregressive Transformers and Inference-time Retrieval"☆151Updated last year
- All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteins☆90Updated 2 months ago
- ML-guided enzyme engineering☆61Updated 3 weeks ago
- gRNAde: Geometric Deep Learning for 3D RNA inverse design (ICLR 2025 Spotlight)☆197Updated 2 months ago
- ☆59Updated last year
- Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. http:…☆121Updated 3 weeks ago
- A Modular Architecture for Deep Learning Systems☆40Updated this week
- Minimal AlphaFold☆53Updated 8 months ago
- ☆45Updated last month
- Supporting code for our paper "Protein Sequence Modelling with Bayesian Flow Networks"☆42Updated 2 months ago
- A short course on proteins and protein design aimed at early career students☆154Updated 9 months ago
- List of computational protein design research labs☆172Updated 3 months ago
- Lbster: Language models for Biological Sequence Transformation and Evolutionary Representation☆97Updated this week
- ☆109Updated last year
- Benchmarking framework for protein representation learning. Includes a large number of pre-training and downstream task datasets, models …☆235Updated 2 weeks ago
- Pretraining infrastructure for multi-hybrid AI model architectures☆155Updated this week
- AlphaFold Meets Flow Matching for Generating Protein Ensembles☆438Updated 4 months ago
- Ankh: Optimized Protein Language Model☆222Updated last year
- RNAFlow: RNA Structure & Sequence Design via Inverse Folding-Based Flow Matching☆59Updated 9 months ago
- RITA is a family of autoregressive protein models, developed by LightOn in collaboration with the OATML group at Oxford and the Debora Ma…☆96Updated 2 years ago