Alternatives and similar repositories for foldcomp

Users that are interested in foldcomp are comparing it to the libraries listed below

• pylelab / USalign
  Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins
  ☆167Updated 8 months ago
• HWaymentSteele / AF_Cluster
  Predict multiple protein conformations using sequence clustering and AlphaFold2.
  ☆168Updated 2 months ago
• JinyuanSun / PymolFold
  Protein folding in Pymol
  ☆127Updated last month
• phbradley / alphafold_finetune
  Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions
  ☆167Updated 2 years ago
• martinez-zacharya / TRILL
  Sandbox for Deep-Learning based Computational Protein Design
  ☆120Updated 2 weeks ago
• uw-ipd / RoseTTAFold2
  ☆205Updated 8 months ago
• gjoni / trDesign
  trRosetta for protein design
  ☆183Updated 4 years ago
• oxpig / AntiFold
  Improved antibody structure-based design using inverse folding
  ☆147Updated 3 weeks ago
• ProteinDesignLab / protein-design-tutorials
  Tutorials, cheat sheets, and other resources for computational methods for protein design.
  ☆127Updated 2 years ago
• aqlaboratory / rgn2
  ☆108Updated 2 years ago
• JeffSHF / ColabDock
  Code for ColabDock paper
  ☆150Updated 7 months ago
• mheinzinger / ProstT5
  Bilingual Language Model for Protein Sequence and Structure
  ☆288Updated 11 months ago
• fhalab / MLDE
  A machine-learning package for navigating combinatorial protein fitness landscapes.
  ☆130Updated 4 years ago
• brianhie / efficient-evolution
  Efficient evolution from protein language models
  ☆217Updated 2 years ago
• RosettaCommons / trRosetta2
  Repository for publicly available deep learning models developed in Rosetta community
  ☆121Updated 4 years ago
• FreshAirTonight / af2complex
  Predicting direct protein-protein interactions with AlphaFold deep learning neural network models.
  ☆166Updated last year
• OATML-Markslab / ProteinNPT
  Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"
  ☆125Updated last month
• debbiemarkslab / EVcouplings
  Evolutionary couplings from protein and RNA sequence alignments
  ☆294Updated 2 months ago
• adaptyvbio / ProteinFlow
  Versatile computational pipeline for processing protein structure data for deep learning applications.
  ☆269Updated last year
• steineggerlab / folddisco
  Fast indexing and search of discontinuous motifs in protein structures
  ☆108Updated this week
• prihoda / AbNumber
  Convenience Python APIs for antibody numbering using ANARCI
  ☆111Updated 7 months ago
• pengzhangzhi / faplm
  FAPLM: A Drop-in Efficient Pytorch Implementation of Protein Language Models
  ☆160Updated 4 months ago
• ShintaroMinami / PyDSSP
  A simplified implementation of DSSP algorithm for PyTorch and NumPy
  ☆97Updated 6 months ago
• patrickbryant1 / Umol
  Protein-ligand structure prediction
  ☆235Updated 4 months ago
• debbiemarkslab / SeqDesign
  Protein design and variant prediction using autoregressive generative models
  ☆117Updated last year
• oxpig / ANARCI
  Antibody Numbering and Antigen Receptor ClassIfication
  ☆254Updated last year
• soedinglab / CCMpred
  Protein Residue-Residue Contacts from Correlated Mutations predicted quickly and accurately.
  ☆111Updated 2 years ago
• cbalbin-bio / pymol-color-alphafold
  PyMOL extension to color AlphaFold structures by confidence (pLDDT).
  ☆117Updated last year
• LBM-EPFL / PeSTo
  Geometric deep learning method to predict protein binding interfaces from a protein structure.
  ☆151Updated 2 years ago
• DunbrackLab / IPSAE
  Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3
  ☆173Updated 8 months ago