steineggerlab / foldcompLinks
Compressing protein structures effectively with torsion angles
☆182Updated 4 months ago
Alternatives and similar repositories for foldcomp
Users that are interested in foldcomp are comparing it to the libraries listed below
Sorting:
- Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins☆165Updated 7 months ago
- Protein folding in Pymol☆127Updated 2 weeks ago
- ☆108Updated 2 years ago
- A machine-learning package for navigating combinatorial protein fitness landscapes.☆129Updated 4 years ago
- Sandbox for Deep-Learning based Computational Protein Design☆119Updated 2 weeks ago
- Predict multiple protein conformations using sequence clustering and AlphaFold2.☆165Updated 2 months ago
- Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions☆166Updated last year
- Tutorials, cheat sheets, and other resources for computational methods for protein design.☆124Updated 2 years ago
- ☆203Updated 7 months ago
- Code for ColabDock paper☆148Updated 7 months ago
- Efficient evolution from protein language models☆217Updated 2 years ago
- trRosetta for protein design☆183Updated 4 years ago
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆125Updated 3 weeks ago
- Improved antibody structure-based design using inverse folding☆144Updated 3 months ago
- Bilingual Language Model for Protein Sequence and Structure☆280Updated 11 months ago
- Convenience Python APIs for antibody numbering using ANARCI☆109Updated 6 months ago
- ☆116Updated last year
- Predict the structure of immune receptor proteins☆166Updated 3 weeks ago
- Fast indexing and search of discontinuous motifs in protein structures☆102Updated this week
- ☆73Updated 4 years ago
- Versatile computational pipeline for processing protein structure data for deep learning applications.☆267Updated last year
- Repository for publicly available deep learning models developed in Rosetta community☆120Updated 4 years ago
- Protein Residue-Residue Contacts from Correlated Mutations predicted quickly and accurately.☆110Updated 2 years ago
- A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design☆109Updated last year
- Geometric deep learning method to predict protein binding interfaces from a protein structure.☆150Updated 2 years ago
- Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3☆164Updated 8 months ago
- Protein design and variant prediction using autoregressive generative models☆117Updated last year
- A simplified implementation of DSSP algorithm for PyTorch and NumPy☆96Updated 6 months ago
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆86Updated last year
- AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…☆110Updated last week