A Transcriptomics-Proteomics Integration Pipeline
☆22Apr 11, 2024Updated 2 years ago
Alternatives and similar repositories for Omix
Users that are interested in Omix are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- SUmmarizing Multiple Enrichment analysis Results☆10Nov 14, 2024Updated last year
- ☆13Feb 29, 2024Updated 2 years ago
- Cell Annotation using Machine Learning-based method for the presence of Unknown cells (CAMLU)☆13May 19, 2025Updated last year
- ☆15Mar 14, 2023Updated 3 years ago
- Metagenomics microbial abundance quantification☆28Sep 22, 2022Updated 3 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- 16S rRNA Sequencing Data from the Human Microbiome Project☆10May 14, 2026Updated 3 months ago
- A end-to-end scRNA-seq analysis pipeline for cross-group comparison☆19Aug 4, 2026Updated 2 weeks ago
- ☆16Jun 18, 2020Updated 6 years ago
- mesa package for Methylation Enrichment Sequencing Analysis☆16Jul 28, 2026Updated 3 weeks ago
- Identify Intra-, Inter-donor variations in bulk or single cell longitudinal dataset☆28Jul 31, 2023Updated 3 years ago
- ☆14Aug 31, 2016Updated 9 years ago
- IgSimulator is a versatile tool for simulation of immunoglobulin repertoire☆12Nov 25, 2016Updated 9 years ago
- ☆13Jan 29, 2021Updated 5 years ago
- GOAT: efficient and robust identification of gene set enrichment☆15Jul 11, 2026Updated last month
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆10Jun 13, 2020Updated 6 years ago
- ☆17Jun 17, 2021Updated 5 years ago
- MicrobeCensus estimates the average genome size of microbial communities from metagenomic data☆49Apr 14, 2020Updated 6 years ago
- IsoVis enables fast and informative visualization of isoform structures and expression levels.☆16Aug 6, 2026Updated last week
- ☆26Oct 9, 2020Updated 5 years ago
- ☆12Mar 31, 2023Updated 3 years ago
- VIPER (Variant InsPector and Expert Rating tool) can be utilised to view variant calls and decide whether or not those are true or false …☆16Jan 17, 2022Updated 4 years ago
- The Microbial Co-occurrence Network Explorer☆21Oct 17, 2023Updated 2 years ago
- deconvolution for RNAseq and bisulfite sequencing☆12Aug 17, 2020Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Secure and federated genome-wide association studies☆18Mar 19, 2025Updated last year
- Gene Set Enrichment Analysis Made Awesome☆12May 11, 2018Updated 8 years ago
- This is a read-only mirror of the CRAN R package repository. TOmicsVis — Transcriptome Visualization Process Scheme. Homepage: https://…☆16Aug 28, 2023Updated 2 years ago
- detect temperate phage (active prophage) in assembled bacterial genome sequences☆15Feb 10, 2022Updated 4 years ago
- Differential analysis of multi-omics data based on the Tweedie distribution☆31May 7, 2026Updated 3 months ago
- R functions underlying ExpressAnalyst☆14Updated this week
- Bioinformatics tools for dealing with Multiple Alignment Format (MAF) files.☆11Aug 11, 2026Updated last week
- ☆10May 31, 2022Updated 4 years ago
- Single-cell dubious embedding detector (scDED): a statistical method for detecting dubious non-linear embeddings☆51May 14, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- R/Bioconductor package - STRUCT (STatistics in R Using Class Templates) Toolbox: An extensive set of data (pre-)processing and analysis m…☆11Apr 16, 2026Updated 4 months ago
- High-resolution strain-level microbiome composition analysis tool based on reference genomes and k-mers☆45Apr 8, 2024Updated 2 years ago
- HoCoRT - Remove specific organisms from sequencing reads☆17Jan 5, 2025Updated last year
- SKATE R Utilities☆10Mar 7, 2026Updated 5 months ago
- CircSplice☆11Feb 27, 2019Updated 7 years ago
- A repository for large-scale microbiome datasets, formatted for phyloseq☆41Apr 8, 2024Updated 2 years ago
- Custom scripts used in "Spatiotemporal DNA Methylome Dynamics of the Developing Mammalian Fetus"☆11Oct 15, 2020Updated 5 years ago