Alternatives and similar repositories for visium_heart

Users that are interested in visium_heart are comparing it to the libraries listed below

• Chuxj / CRC-atlas
  ☆32Updated last year
• youqiongye / CRC_scRNAseq
  ☆47Updated 3 years ago
• yanailab / PanCancer
  Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…
  ☆31Updated 3 years ago
• lfranzen / spatial-lung-fibrosis
  Repository for all R scripts used for the bioinformatic analyses of the mouse and human 10x Genomics Visium spatially resolved transcript…
  ☆29Updated last year
• sunnyzwu / stromal_subclasses
  code for data processing and visualisation associated with the stromal subclasses manuscript
  ☆13Updated 5 years ago
• aliceygao / pan-Fibroblast
  ☆53Updated last year
• ChanLab-UTSW / BreastCancer_Integrated
  ☆32Updated 9 months ago
• bioinfo-biols / SEVtras
  sEV-containing droplet identification in scRNA-seq data (SEVtras)
  ☆26Updated 9 months ago
• liziyie / Onco-fetal-CAF-in-HCC
  ☆22Updated 2 years ago
• tiroshlab / Spatial_Glioma
  Code for major analyses in "Integrative spatial analysis reveals a multi-layered organization of glioblastoma" paper
  ☆53Updated 10 months ago
• guangchunhan / LUAD_Code
  ☆24Updated 2 years ago
• smorabit / hdWGCNA_paper
  Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)
  ☆17Updated 2 years ago
• friedpine / scRNASeq_ESCC
  The code for processing single cell RNA-Seq dataset from ESCC cohorts
  ☆12Updated 4 years ago
• ccruizm / GBmap
  Code used to create the core and extended GBmap, including downstream analyses (cell-cell interactions, spatial transcriptomics deconvolu…
  ☆65Updated 2 years ago
• bio-Pixel / panVC
  ☆55Updated last year
• Teichlab / SKM_ageing_atlas
  ☆12Updated last year
• Yelab2020 / Cottrazm
  Construct Tumor Transition Zone Microenvironment
  ☆49Updated 5 months ago
• SiyuanHuang1 / cpplot
  Visualize the results of cell-cell communication analysis
  ☆24Updated 2 years ago
• BKI-immuno-KNS / MANAscore
  A minimal gene set characterizes multiple classes of tumor-specific TIL among different cancer types
  ☆11Updated 9 months ago
• shyhihihi / MERCI
  MERCI for tracing of mitochondrion transfer between single cancer and T cells
  ☆24Updated last year
• FloWuenne / scFunctions
  Functions for single cell data analysis
  ☆32Updated 4 years ago
• lifei176 / Single-cell-atlas-of-sex-differences-and-androgen-effects
  ☆17Updated last year
• jumphone / Vector
  Unsupervised Inference of Developmental Directions for Single Cells
  ☆22Updated last year
• aet21 / SCENT
  Estimation of Single-Cell Potency with Single Cell Entropy
  ☆43Updated 2 years ago
• christophhmayr / 2023_Mayr
  Code for the spatial transcriptomic paper on IPF lungs
  ☆20Updated last year
• compbioNJU / scPDAC
  R code used to analyze single cell PDAC data
  ☆41Updated last year
• QiangShiPKU / CoVarNet
  ☆49Updated 3 months ago
• Lan-lab / sc-GC
  ☆31Updated 3 years ago
• pritykinlab / ulipstic-analysis
  ☆10Updated last year
• teresho4 / scRNA-seq_atlas_Hs_PBMC_aging
  ☆17Updated 2 years ago