KramannLab / visium_heartLinks
Spatial transcriptomics of heart tissue
☆24Updated 3 years ago
Alternatives and similar repositories for visium_heart
Users that are interested in visium_heart are comparing it to the libraries listed below
Sorting:
- Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…☆31Updated 3 years ago
- ☆31Updated last year
- ☆21Updated 2 years ago
- Code for major analyses in "Integrative spatial analysis reveals a multi-layered organization of glioblastoma" paper☆52Updated 8 months ago
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆27Updated 4 years ago
- ☆47Updated 3 years ago
- code for data processing and visualisation associated with the stromal subclasses manuscript☆11Updated 4 years ago
- Repository for all R scripts used for the bioinformatic analyses of the mouse and human 10x Genomics Visium spatially resolved transcript…☆28Updated last year
- ☆31Updated 6 months ago
- ☆22Updated last year
- Robust identification of perturbed cell types in single-cell RNA-seq data☆32Updated 9 months ago
- analyses of scRNAseq and spatial transcriptomics dataset of developing human pancreas at multiple gestational stages☆10Updated 2 years ago
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆26Updated 6 months ago
- Single-Cell Inference of Class Switch Recombination☆19Updated last week
- A minimal gene set characterizes multiple classes of tumor-specific TIL among different cancer types☆11Updated 6 months ago
- ☆12Updated last year
- ☆16Updated last year
- Unsupervised Inference of Developmental Directions for Single Cells☆22Updated last year
- ☆48Updated last year
- Aligning gene expression trajectories of single-cell reference and query systems☆73Updated last month
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆38Updated 4 years ago
- Functions for single cell data analysis☆32Updated 4 years ago
- The code for processing single cell RNA-Seq dataset from ESCC cohorts☆11Updated 4 years ago
- ☆10Updated 2 years ago
- Lung cancer 10X analysis☆11Updated 4 years ago
- Code for the spatial transcriptomic paper on IPF lungs☆19Updated last year
- A High Effect Marker Gene Search Tool for Single-cell RNA-seq Analysis☆32Updated last year
- ☆37Updated 2 years ago
- ☆30Updated 4 months ago
- Integration of gut cell atlases☆27Updated 7 months ago